Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC	NC_000913	1,326,599	Δ36 bp	9.1%	coding (1854‑1889/1896 nt)	yciQ →	enhancer of membrane protein expression; putative inner membrane protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1326598	32 (0.210)	3 (0.020)	3/512	NT	9.1%	coding (1853/1896 nt)	yciQ	enhancer of membrane protein expression; putative inner membrane protein
	?	NC_000913	1326635 =	29 (0.200)					coding (1890/1896 nt)	yciQ	enhancer of membrane protein expression; putative inner membrane protein

CTGGACAGCAACGTTATGCCCACGGTGAAGCTATCGTTAACTATCTTGCGCGTAAAGAGGCAGCAACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCA  >  NC_000913/1326301‑1326892                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                       tgtgACAGAAAAGTTAGGCCCACGGTGAAGCTATCGTTAACTATTTTGCGCGTAAAGAGGCCTCAGCACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGGTTCTAGGTGGGGCTAGATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTGCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGc                                                                                                                                                                                                                                                                                                     <  1:1048430/298‑1 (MQ=255)                                tATGGTTGACGATCTTGCGCGTAAAGAGGCAGCCACACACAGGGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCGTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTGATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCggtggt                                                                                                                                                                                                                                                                      <  2:1163714/301‑1 (MQ=255)                                 aTCGTTAACTATCTTGCGCGTAAAGAGGCAGCAACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGATATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCAGGAGATTGCCCGTAACGGCGTTTTTTTCTCCTTACATACGCCCCTACGTTGCGGGGCCACTACCCGCTTGTTGGGGAGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGcggcgggcgtagtg                                                                                                                                                                                                                                                                     >  2:514500/1‑293 (MQ=255)                                         cTATCTTGCGCGTAAAGAGGCAGCAACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTAACGACGCACCTAAGTTGCGGGGCCAATACCAATTTGTTGGGGCGAAGTTATTCAGGTGGTGGTGCTGGCGGCGGGGCGGGTGGCGGCGGAGGTGGGGGCTGGtca                                                                                                                                                                                                                                                             >  2:1146054/1‑299 (MQ=255)                                                    tgaaaGAGGCAGCAACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACGGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATg                                                                                                                                                                                                                                                  <  2:1030353/299‑1 (MQ=255)                                                    gTAAAGAGGCAACAACAAAGCGTGGGCGAAGGCGGAAAGAGGAAAAACGGAAACTGGATTACGAGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGGTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTCACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGctggtaattaagcttatgttaatcgaaacaagctttaaccataaagatagtgt                                                                                                                                                                                                                                                   <  2:328421‑M1/300‑54 (MQ=255)                                                          tgggcgcaacgcacctgggACGGCGGCGGAAATGGGGTACATCGCAATGTGATTACGCGTTCGTAGGTTGGTCCATGTCGGCAAATGTGGGGACGGAATGGGCGTTACGCTTTGTCCCTTCGGTTTCTTCGGCGAGTCGCGCTCTAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATc                                                                                                                                                                                                                                            <  1:84182/284‑1 (MQ=255)                                                             cagcaACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTCACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCTGAGGCGGGGGTGGCTGGTAATTCAGc                                                                                                                                                                                                                                                       >  1:928551/1‑287 (MQ=255)                                                             cagcaACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGc                                                                                                                                                                                                                                                       <  2:928564/287‑1 (MQ=255)                                                                       caGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGAGCTCCAGAGATTGGCCGTACCGGCGTTTTATTCTCATTCCAGCCGCACCTAAGTTGCGGGGCCACTACCAGTTTGTTGGGGCGAAGTTTTTCCGGGGGGGTGGCTGGCGGCGGCCCGGTTGGGGGGGGGGGGGATGGCTGGTATTTAGACTGAGGTTTGTCGAAACAAGCtttt                                                                                                                                                                                                                               >  1:1448814/1‑300 (MQ=255)                                                                         gTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCCTTACAGACGCACCTAAGTTGCGGGGCCAATACCCGTTTGTTTGGGCGAGGTTATTCCGGTGGTGGTGCGGGCGGCGCCGCGGGTGGCGGGGGGGGGGGTGGCTTGTAGTTACGCTGTTGGTCATGGAACCCAGCATTaa                                                                                                                                                                                                                              >  1:1505148/1‑300 (MQ=255)                                                                           ggACGTGGGCGGAAAGGGGAAACACGGAAACTGGATGACTGGTTGCTAGGTTGGGCGATATCGGCAAATTTGGGGATGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAAcc                                                                                                                                                                                                                            <  2:404476/300‑1 (MQ=255)                                                                                       ataGGGGAAACAGGGATATTGGATGATGCGGTGCTAGGTTGGGCTAGGCTGGCAAAGTGGGCGAGGGGATGGGCGTTACGCGTTGCCACGTCGCTTTATTCGGCGATTCGCGCTCCAGAGATTGCCCGGAACGGCGTTTGATTCTCAGTACAGACGCACCTGCGGTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAgtgt                                                                                                                                                                                                               <  1:514492/299‑1 (MQ=255)                                                                                             gAAACCAGGAAACGGGAGTTCGCGTTGGTATGTTGGGCTATCGCGGTAAAGTTGGGGAGGGAATTGGCGTTCCGCATTGCCCCTTCGCGTTCTTCGGCGATTCGCGCACCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGAGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGGAGTAt                                                                                                                                                                                                          <  1:793854/300‑1 (MQ=255)                                                                                             gAAACAAGGAAACGGGATTACTGGTTGATATGTGTGGCTAGATCGGCAAATTTGGGGAGGGAATGGTGGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACTGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTAt                                                                                                                                                                                                          <  1:370121/300‑1 (MQ=255)                                                                                                                     ttGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGTTGCCCATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTGCTTAAGCTGATGTTAATCTAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATa                                                                                                                                                                                 >  2:269977/1‑301 (MQ=255)                                                                                                                           ggTTGGGCTATATCGGCAAATTTGGGGAGGTAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGCTAGTGTAGTATGTTGCGCCTCAAATCCAGGCCGATCAAAGt                                                                                                                                                                            >  2:1172342/1‑300 (MQ=255)                                                                                                                                            ctaTTCGGGGGGGGAAGGGGCGGTACGCCTTGCCCGTGCGTGTGCTTCGGCGATTCGCGCTCCGGAGATTGCCCGTAGCGGCGTTTTATTCTCAGTACAGACGCACCTAAGTTGCGTGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCTGGCCGATAAACGTCGAGTCGTTTACTTAAgg                                                                                                                                                          <  2:231859/299‑1 (MQ=255)                                                                                                                                              ttttGGGAGGGGAATGGGCGTTACGCATTGGCCCTGCGCTTGCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGGTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGcc                                                                                                                                                        <  1:269970/300‑1 (MQ=255)                                                                                                                                                                                        cttcGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGAt                                                                                                                                                                                                                    <  1:538560/199‑1 (MQ=255)                                                                                                                                                                                        cttcGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGAt                                                                                                                                                                                                                    >  2:538568/1‑199 (MQ=255)                                                                                                                                                                                              cGATTCGCGGTCCAGAGATTGCCCGGAACGGGGTGTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTc                                                                                                         <  1:1172309/300‑1 (MQ=255)                                                                                                                                                                                                  tcgggcgcctggaatgtcccGTAACGGCTGTTTAGTCTCATGAAGGACGCACCTAAGTGGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGAGAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACt                                                                                                    <  1:139487/284‑1 (MQ=255)                                                                                                                                                                                                       cTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGt                                                                                                                                                                       >  2:810482/1‑229 (MQ=255)                                                                                                                                                                                                       cTCCAGAGATTGCCCGTAAAGGCGTTTTATTCTAATTACAGACGCACCTAAGTTGCTGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACACGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGt                                                                                                                                                                       <  1:810471/229‑1 (MQ=255)                                                                                                                                                                                                             tgaTTTCCAGGAACGGCGTGTTATTCTCAGTACAGGCGTACCTAATGTGCGGTGTCAAGACCAGTTTGGTGGGGCGAAGTTATTCCGTTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGTGGTGGGGGCTGGTAATTAAGCTGATGTTAACCGAAACAAGCGTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGcac                                                                                         <  1:1146022/300‑1 (MQ=255)                                                                                                                                                                                                                  gaccGTAACGGCGTTGGAGTCTCATTACAGACGCACCTAAGTTGCGGGGGCAATACCAGTTGGGTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCGTTAACCATAAAGATAGTGTAGTATGTTg                                                                                                                                                                                                      <  2:1152363/185‑1 (MQ=255)                                                                                                                                                                                                                  gCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCGGTTTGTTGGGGCGAAGTTATTCCGGTGGGGGTGCTAGCGGCGGCGCGGGTGGCGGAGGCGGTTGTGGCTGGTACTTGAGCTGCTGTTAATCGAACCAGGCTTTAACCATAAAGATAGTGTAGTATGttt                                                                                                                                                                                                      >  1:1152330/1‑186 (MQ=255)                                                                                                                                                                                                                   cccGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACt                                                                                                                                <  2:259940/256‑1 (MQ=255)                                                                                                                                                                                                                              gTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGctggtaattaagctgatgttaatcgaaacaagctttaaccataaagat                                                                                                                                                                                                                                                        <  2:1019529‑M1/125‑49 (MQ=255)                                                                                                                                                                                                                              gTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGctggtaattaagctgatgttaatcgaaacaagctttaaccataaagat                                                                                                                                                                                                                                                        >  1:1019501‑M1/1‑77 (MQ=255)                                                                                                                                                                                                                                    aaagaatgaCAGACTCACCTAAGTTGCGGGGCCAAGAACAGTGTGGTGGGGCGAAGTTATGCCGGTGGGGGTGCGGGCGGCGGCGCAGGTGGCGGAGGCGGTGGTGGCGGGTAATTAAGCTGATGTTAATCGAAACAAGCTGTAACCATAAAGATAGTGTAGTATGTTGCGCCGCAAAGCCAGGCCGATAAACGCCGAGTCGTTTATTTAAGGCCTGAAGAGTTCAAACAGACTGTACTATCAGTGAGTCAGATGTAAGTTCTTACTCACTGTTGCACAAAAGCATAGCAGACGCCTGGGa                                                                  <  2:372780/293‑1 (MQ=255)                                                                                                                                                                                                                                        cATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCATGCCGATAACCGTCGAGGCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTTATAACAATGACTCAGATGTAAGTTCTGACTCACTGATGCACCACAACATAACAGACgaattgag                                                                  >  1:372774/1‑290 (MQ=255)                                                                                                                                                                                                                                                                    cAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAag                                                                                                                                                   <  2:943783/188‑1 (MQ=255)                                                                                                                                                                                                                                                                    cAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAag                                                                                                                                                   >  1:943770/1‑188 (MQ=255)                                                                                                                                                                                                                                                                                gttgGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGGAGAGTTCAAACCACCTTTACGAACAGTGACACCGATGTACGTTCTGAATCACTGTGGCACAAAAGCACATCAGACGCGTGGGAAGGCGACACCACAAGGAAGATCAATAAGCCACAAGAGGCAGaaa                      >  1:1229115/1‑301 (MQ=255)                                                                                                                                                                                                                                                                                                ataggtgttgtctgcaaattaagctgatgtaaatcgaaacaagctttaaccataaatatagcttagtatgttgcgcctcaaagctaggccgataaacgtcgagtcctttacgtaaggcctgaagagttcaaacagactttactatcagtgagtcagatgtaagttctgactcacttttgcacaaaagcatatcagacgcctgggacggcgacaccaaaaggaagctctatgagcgaaaagctacataaagtgctggcgcgtgccggccacggttctcgccgtgaaatcgaatctattattg      <  2:507155‑M1/298‑291 (MQ=255)                                                                                                                                                                                                                                                                                                    gtggtgGctggtaattaagctgatgttaatcgaaacaagctttaaccataaagatagtgtagtatgttgcgcctcaaagccaggccgataaacgtcgagtcgattacttaagggctgaagagttcaaacagactttactatcagtgagtcagatgtaagttctgactcactgttgcaccaaagcatatcagacgcctgggaaggcgacaccaacacgaagctctatgcgctaaaacctacagaaagtgctgtctcgtgccgggcacggttctcccctggaactcgaaactcttagtgcttg  >  1:507147‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                       CTGGACAGCAACGTTATGCCCACGGTGAAGCTATCGTTAACTATCTTGCGCGTAAAGAGGCAGCAACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCA  >  NC_000913/1326301‑1326892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.