Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,815,909	Δ10 bp	pseudogene (632‑641/669 nt)	rph ←	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815909	3815918	10	47 [0]	[0] 47	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815908	0 (0.000)	47 (1.130)	45/596	0.0	100%	pseudogene (642/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
	?	NC_000913	3815919 =	0 (0.000)					pseudogene (631/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

GCCTAACAGTGCCAGATCGCGCCCGGTATTAAACAGCCCGGCGTTGAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCG  >  NC_000913/3815619‑3816202                                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                             cgtaaaaacggcctaacagtgccagatcgcgcccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtg                                                                                                                                                                                                                                                                                              <  2:49791‑M2/1‑1 (MQ=255) cgtaaaaacggcctaacagtgccagatcgcgcccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcggcccagagccaacaagatgagtg                                                                                                                                                                                                                                                                                              >  1:252291‑M2/301‑301 (MQ=255)              taacagtgccagatcgcgcccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctaaaatggattcgattcccctcgggccagagccaacaagaggagtGGGTGAACGGCTCg                                                                                                                                                                                                                                                                                 >  2:288759‑M2/288‑301 (MQ=255)                    tgccagatcgcgcccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTc                                                                                                                                                                                                                                                                            <  2:206425‑M2/19‑1 (MQ=255)                       cagatcgcgcccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgcgaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagattgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCATTCTGc                                                                                                                                                                                                                                                                         >  2:297199‑M2/279‑300 (MQ=255)                                cccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatctggtttcatgccttcgctcctcatcttacttttctacagccaaaaaaaaggcgactcatcagtcgccttaaacttcagtttgccagcgccgccttctgctccgctacaatggattcgattcccctcgtgccagagccacaaagatgagtGGGGTAACTGCTCGCCTCCTGCCGCCCCC‑Tg                                                                                                                                                                                                                                                               >  1:30676‑M2/270‑300 (MQ=255)                                        aaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAat                                                                                                                                                                                                                                                      <  2:122730‑M2/40‑1 (MQ=255)                                         aaacagcccggcgttgaagaaagtggggtttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgacgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAatg                                                                                                                                                                                                                                                     <  1:333547‑M2/41‑1 (MQ=255)                                                    cgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGt                                                                                                                                                                                                                                           >  2:36628‑M2/250‑300 (MQ=255)                                                            aaatagtggctttgaccccatgagttctgcgtaaacccgcaaaactttaacacctgcttgctaagagcaaattcaatctactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGtca                                                                                                                                                                                                                                  <  1:299437‑M2/60‑1 (MQ=255)                                                            aaataggggcttttgctcccggatttcagcgtaaactcgccaaactttaacacctgtttgctaagcgcaaattcaatacactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcagcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGtca                                                                                                                                                                                                                                  <  1:307711‑M2/60‑1 (MQ=255)                                                              ataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttccgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGtcat                                                                                                                                                                                                                                 >  2:295582‑M2/240‑300 (MQ=255)                                                                        ttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCa                                                                                                                                                                                                                      <  2:252589‑M2/72‑1 (MQ=255)                                                                            ccccggatttcagctgaaactacccaaactttaaccactgcttgctaacgccaaaatcaataagctggcgctgatatggtttcatgccttcgctccgcatcgtacttatctacagacaaaaaaaaggcgactcatcaggcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTc                                                                                                                                                                                                                  <  1:345125‑M2/76‑1 (MQ=255)                                                                              ccgggttcaagcggaaactcggcaaacgtaagcacctgcttgctaagcgcaaagtcaataaactggcgctgatatggtttcatgccttcgctcctaatctgacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCgg                                                                                                                                                                                                                <  1:253537‑M2/78‑1 (MQ=255)                                                                                  atttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCCATGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                                                                                                                                                                                               >  2:55323‑M2/220‑299 (MQ=255)                                                                                           aaaactcgccaaactttaacacctgcttgctaagcgcaaatacaataaactggcgcgtatatggtatcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgacgcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                                                                                                                                                   <  1:36595‑M2/91‑1 (MQ=255)                                                                                            aaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCagag                                                                                                                                                                                                  <  2:151130‑M2/92‑1 (MQ=255)                                                                                                 cgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCtt                                                                                                                                                                                              >  2:5973‑M2/205‑300 (MQ=255)                                                                                                                 ctgcttgctaagcgaaaattcaataaactgggcctaatatggttgcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttccgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCg                                                                                                                                                                             <  1:295227‑M2/113‑1 (MQ=255)                                                                                                                      gctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCTGATCGCaaa                                                                                                                                                                         >  2:187697‑M2/184‑300 (MQ=255)                                                                                                                           agcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCtt                                                                                                                                                                   >  1:330688‑M2/179‑301 (MQ=255)                                                                                                                              gcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCg                                                                                                                                                                 >  2:216507‑M2/176‑300 (MQ=255)                                                                                                                              acaaatgcaaaaaacgggcgctgatctgggttcatgccttcgcccctcatcttacttttctacacaaaaaaaaaaggcgactcatcagtcgccttaaaaatcagttggccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGc                                                                                                                                                                <  1:5973‑M2/126‑1 (MQ=255)                                                                                                                                  aattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtctctacaatggattcgattcccctcgggccagagcaaacaagatgagtGGGGGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACCACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACTTATTCCCGATCTCAAACCGCTTCGCCGtt                                                                                                                                                            >  1:149545‑M2/172‑301 (MQ=255)                                                                                                                                                   tgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGaaa                                                                                                                                           >  2:303460‑M2/155‑301 (MQ=255)                                                                                                                                                    ctctgccgagtttcccgtccctcctaatcttaattttctacagacaaaaaaaaggcgactcaacagtccccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggcccgagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAAc                                                                                                                                          <  1:201251‑M2/148‑1 (MQ=255)                                                                                                                                                                tgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCAcaattccgacagacacagatcggaagag                                                                                                                              >  2:201479‑M2/142‑289 (MQ=255)                                                                                                                                                                     ttcgctcctcatcttacttttcgacagacaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCtt                                                                                                                         <  2:149716‑M2/165‑1 (MQ=255)                                                                                                                                                                                            cagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTg                                                                                                  >  1:91788‑M2/114‑301 (MQ=255)                                                                                                                                                                                             agacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACCGCGGCTACCATCCCTTTCATCGGCTTGGTTTTCAGCTTg                                                                                                  >  1:44021‑M2/113‑300 (MQ=255)                                                                                                                                                                                             aacaaaaaaaaaggagactcaacagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGc                                                                                                 <  1:187481‑M2/189‑1 (MQ=255)                                                                                                                                                                                                caaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGt                                                                                              >  2:369242‑M2/110‑301 (MQ=255)                                                                                                                                                                                                    aaaacggcgactcatcggtgcccttaaaactcagtttgccagcgccgccttctgcgtagcgacaatggattgaggtcccctcgtgccaaagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCCTGCCGTTTTc                                                                                          <  2:30709‑M2/196‑1 (MQ=255)                                                                                                                                                                                                      aaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTcca                                                                                        <  2:44067‑M2/198‑1 (MQ=255)                                                                                                                                                                                                      aaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTcca                                                                                        <  2:271099‑M2/198‑1 (MQ=255)                                                                                                                                                                                                          gcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTccacc                                                                                      <  2:91888‑M2/200‑1 (MQ=255)                                                                                                                                                                                                               ccatcagtcgccttaaaaatcagtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCt                                                                               <  2:331101‑M2/207‑1 (MQ=255)                                                                                                                                                                                                                 atcagtcgccttaaaaatcagcttgcccgcgccgccttctgcgtagctaccatggattcgattcccctcgggccaaagccaacaagatgggtGGGTGAACGGCTCTCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGt                                                                             <  1:288417‑M2/209‑1 (MQ=255)                                                                                                                                                                                                                               aaatcagttggccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTT‑CACCAGCTTCTGTAGCGCATCTACCAgc                                                              <  1:368790‑M2/223‑1 (MQ=255)                                                                                                                                                                                                                                    agtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCa                                                          >  2:137071‑M2/74‑301 (MQ=255)                                                                                                                                                                                                                                     gtttgccagcgccgccttctgcgtcgctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGCTCGCAAACCGCTTCGCCGTTCACAATTCCGACATAAACCGCGGCTACCACCCCTTTCCTCGGATCCGTTTTCACCTTGCCTGTCTCCCCCATCTTCTGTAGCCCCTCTCCCAGCCCCa                                                          >  1:201677‑M2/73‑300 (MQ=255)                                                                                                                                                                                                                                                               ctacaatggattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCTCCCGTAATCGACGCGGTa                                >  2:149095‑M2/47‑300 (MQ=255)                                                                                                                                                                                                                                                                      cgattcgattcccctcgggccagagccaacaagatgaggGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGc                         <  1:303088‑M2/261‑1 (MQ=255)                                                                                                                                                                                                                                                                       gattcgattcccctcgggccagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGcc                        <  1:148924‑M2/262‑1 (MQ=255)                                                                                                                                                                                                                                                                                          cagagccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCCACGCGGTACGCGTGCCACCATCACCCTGCAGCACg     >  1:217244‑M2/20‑300 (MQ=255)                                                                                                                                                                                                                                                                                             agccaacaagatgagtGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCg  <  1:216266‑M2/284‑1 (MQ=255)                                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                             GCCTAACAGTGCCAGATCGCGCCCGGTATTAAACAGCCCGGCGTTGAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCC‑TGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACGCGGTACGCGTGCCACCATCAGCCTGAAGCACGTCG  >  NC_000913/3815619‑3816202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑