mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.27.1 revision 87c22d663cc3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,190 | 0 | A | G | 31.1% | 38.6 / 27.5 | 47 | intergenic (+396/+246) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| * | NC_000913 | 4,296,191 | 0 | A | C | 29.8% | 36.2 / 26.4 | 47 | intergenic (+397/+245) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| * | NC_000913 | 4,296,268 | 0 | T | C | 23.3% | 90.6 / 27.3 | 61 | intergenic (+474/+168) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| * | NC_000913 | 3,688,287 | 0 | A | C | 22.4% | 189.2 / 10.3 | 101 | V296G (GTG→GGG) | bcsC | cellulose synthase subunit |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1870243 = | 111 (1.060) | 4 (0.040) | 4/580 | 14.7 | 3.6% | intergenic (+5/‑142) | yeaH/yeaI | UPF0229 family protein/putative membrane‑anchored diguanylate cyclase |
| ? | NC_000913 | 1870272 = | 108 (1.070) | intergenic (+34/‑113) | yeaH/yeaI | UPF0229 family protein/putative membrane‑anchored diguanylate cyclase | |||||
| * | ? | NC_000913 | 3482195 = | 103 (0.990) | 4 (0.040) | 4/592 | 14.9 | 4.0% | coding (907/1914 nt) | yheS | ABC‑F family protein predicted regulatory ATPase |
| ? | NC_000913 | 3482308 = | 91 (0.880) | coding (1020/1914 nt) | yheS | ABC‑F family protein predicted regulatory ATPase | |||||