| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,621,022 | C→A | R39L (CGC→CTC) | eamA ← | cysteine and O‑acetyl‑L‑serine efflux system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,621,022 | 0 | C | A | 98.2% | 174.6 / NA | 57 | R39L (CGC→CTC) | eamA | cysteine and O‑acetyl‑L‑serine efflux system |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (29/27); minor base T (1/0); total (30/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
ACTATCTTCGATTAACACCAGTACGCCAAAAATCGCTAAGGCGATCCCCGCCAATTGTTTGCCATGCAGTCGCTCCCCGAAAGTAAACGCGCCAAGCATGATAGTAAAAAACGCCTGTGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAAACGCACT > NC_000913/1620736‑1621318 | aCTATATTCGATTAACACCAGTACGCCAAAAATCGCTAAGGCGATCCCCGCCAATTGTTTGCCATGCAGTCGCTCCCCGAAAGTAAACGCGCCAAGCATGATAGTAAAAAACGCCTGTGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGc < 1:54149/301‑1 (MQ=255) cacCAGTACGCCAAAAATCGCTAAGGCGATCCCCGCCAATTGTTTGCCATGCAGTCGCACCCCGAAAGTAAACGCGCCAAGCATGATAGTAAAAAACGCCTGTGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAAATGATGGTTAATCCAAACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTTCGTCAAAAACGATAGCCGGAAAAGCGAACAGGAAAAACAAAAACCCGGCCAACAtatggctgggacac > 2:96816/1‑288 (MQ=255) cAGTACGCCAAAAATCGCTAAGGCGATCCCCGCCAATTGTTTGCCATGCAGTCGCTCCCCGAAAGTAAACGCGCCAAGCATGATAGTAAAAAACGCCTGTGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGACATGTTa < 1:381362/301‑1 (MQ=255) cccAAATATCACTAAGGCCGTCCCCGCCAATTGTGTGCCATGCAGTCGCTCCCCGAAAGTAAACGCGCCAAGCATGATAGTAAAAAACGCCTGGGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGc < 1:478535/300‑1 (MQ=255) gCCATGCAGTCGCTCCCCGAAAGTAAACGCGCCAAGCATGATAGTAAAAAACGCCTGTGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACACCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGAAAAAGCGACCAGAATAAAGAACAAACCGGCCAACATCAACAGTGGCAGGTTATAAAGTCCCCCTGTGATGACCACAAAATTCAGCCCCCAttcc > 2:442456/1‑298 (MQ=255) gAAAGTAAACGCGCCAATCAAGAAAGTAAAAAACGCCTGTGCCTGTAAAACCAGCAAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAAGTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACca < 2:532412/263‑1 (MQ=255) aaaCGCGCCAAGCATGATAGTAAAAAACGCCTGTGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGGTACTGGCAAAAGAAAGAACAGCACACTGCGCACAACTGATGGTTAATCCAAACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGAGACCAGCATAAAGAGCAAACCGGACAGCATACGCGGTGGCATGGTATGACACCCCACTATCATGAAAACAAAAGTTATCCACCATCCAACCAACACCAGTaacaccaacacc > 2:296279/1‑301 (MQ=255) tAAAAAACGCCTGTGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGCGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATATAGCCCCCATACAACCCCTACCAGTCGCGACAACACCCCATCTTTTcgcccacttcc > 2:335228/1‑293 (MQ=255) aaaaaaCGCCTGTGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAACAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCCGCATCAGCGGTGGCATGTTCTGAAGCCCCACTATGATGACCACAAAATTTAGCCACATTACGACCACTACCAGTCGCGGCAAACCCACATCTTCTcgccaaatcccc > 2:547456/1‑292 (MQ=255) gcccggacctgtAAAACCAGCCAAGCCAGTCCAGCAGGAAAACCGAACTTAATGGCACCAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCctc < 1:96835/294‑1 (MQ=255) gtAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACGGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCAt < 1:255076/301‑1 (MQ=255) aaCACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGACACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGACAGCATCAGCGGTGGCATGTTATGACGCCCCACTTTGATGACCACAAAATTTAGCACCCATACGACCACTACCAGTAGCGCCAACACACCATCTTTTAGCGACATTCTACCGCCTCTGAATTTCATCt > 1:37542/1‑301 (MQ=255) aaGCCAGTCCAGCAAGCATCCCGAAGTTAATGGCACAAAAAAGAAAAGCAAACCGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCa < 1:442564/301‑1 (MQ=255) gCNAGTCCNGNNNNNNNNNNNNAGTTAATGNANAAAAAAAGANNANCAAACGGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACAcccc < 1:45382/251‑1 (MQ=255) cAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCCTCTTTTGTAACCAATc > 1:364369/1‑300 (MQ=255) ccGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCCGCGGTGGCATGTTATGAAGACCCACTTTGATGACCACAAAATTTAGCTCACATACGACCACTAACAGTAGCGCAAACACCCAACCTTTTCGCGCCATTCTACAGACTCTCAATTTCATCTTTTATAACTAATCAACtgtatgtaatttat > 2:495555/1‑288 (MQ=255) cGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATa < 1:311209/204‑1 (MQ=255) cGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGATAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAACAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATa > 2:311125/1‑204 (MQ=255) cGAAGTTAATGGCAAAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCCGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGTAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACt < 1:547586/301‑1 (MQ=255) gAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGAACACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTAc > 1:187527/1‑251 (MQ=255) aaTGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCAACTTTGATGACCACAACATGTAGCCCCCATAAGACCACAACCAGTAGCGCCAACACCCCCTCGTTTCGCAACATCCAACCGCCTCTGAATTCCATCCTTTTTACACAATCCAATTAGCTGATTTAACtttttttt > 2:449878/1‑301 (MQ=255) aTGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTAAGTGGTACTTTCGGTCGTGCGACAAAGAAGATAGCCGGAAAAGCGACCAGCATAAAGTGCCAACAGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACGCAAAAATTTAGCCCCCAGACGACGACTACCGTTAGCGCCAACACCAAGTCTTTTCGCGTCATGATACCGTCTCGAAAGTTCATTTTATTTAGCAAATCAACTATGCTCAAATTACTTGTCattt > 1:292903/1‑300 (MQ=255) ggCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCACCCATACCACCACTAACAGTAGCGCCAACAACCCCTCTTTTCGCGACATTCTACAGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTaat > 1:16383/1‑300 (MQ=255) gCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGCTGACCACAAAATTTAGCCCCAATACCACCACTACCAGTAGCCCCAACACCCCATCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCCTTTGTAAGCCACCAACTTAGCTGAATTTCCTTTTCTTTCAc > 2:251418/1‑300 (MQ=255) caaacaaaagaaaagCAACCTGCGAAAAACGGATGGTTATCCCAAACCCAAACAGCAAAATAAGAGGTACGTGCGGTCGTGAGACAACAAAGATAGCCGGAAAAGCAACAAGCATAAAGAGCAAACCAGACAGCATCAGCGGTGGCATGTTATGCAGCCCCCCTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAg < 2:232278/296‑1 (MQ=255) agaaaagCAAACAGCGCAAAACTGAAGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCTGGGGCATGTTATGAAGCCCCACTTTGATGACCACAACATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCg < 1:296362/301‑1 (MQ=255) aaaaCAAACTGCGCAAAACTGATAGTTAGACCATACCCCAGCAGCAAATTAAGTGGTACTTTCTGTCGCGCAACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTa < 2:37538/301‑1 (MQ=255) gCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTc > 1:132180/1‑301 (MQ=255) gcgcAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTAATTTTCTTTAACCGTTGATTCTTTAGTTGCCGGtt > 1:403650/1‑301 (MQ=255) cAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACACAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACACCATCCTTTCCCGACATTCTACCGCCTATGAATTGCCTCTTTTTTAAGCAATCACCTTGGTTGAATTTACTTTTCTTTTAAAGTTTAttattatgtcgtcggtgtac > 2:421225/1‑283 (MQ=255) aaaCTGATGGGTAATCCAAACCCCATCAGCAAAGTAAGTTGAACTTTCGGGCGTGGGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCAGCAGCTGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTacgac < 1:98568/301‑1 (MQ=255) cgggggctcttccgatctccAGAAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCa < 1:416926/283‑1 (MQ=255) ggTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACGTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAACGCCAACACCCCATCTTTTCGCGACATTCAACCGCCTCTGAATTTCATTCTTTGTACGCCATCAACTTAGCTGAATATCCTTTTCTTTAACAGTTTATTCATTAAATGCCGGTTACGCCGGCATTa > 2:118695/1‑300 (MQ=255) gTTAATCCATACCCCAGCAGCAAATTCAGTTGTACTTTCGAGCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCCAACCGGCCAGCATCAACGGTTGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAAt < 2:403557/301‑1 (MQ=255) aTCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCCTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAATAGTTGATTCGTTAGTCGCCGGTTAAGACGGCATTAATtcgc > 2:58294/1‑301 (MQ=255) aTCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTAATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGTTTACGACGGCATTAATgcgc > 1:39379/1‑301 (MQ=255) ccATACCCCAGCAGCAAATTCACGGGTACGTTCGGTGGGGCGAAAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATgcgc < 2:364279/299‑1 (MQ=255) aCCCCAGCAGCAAATTCCGTGATACTTTAGGGCGGGCTACAAAAAAGATAGCAGGAAAAGCGACCAGCAAAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACTCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAAt < 1:454938/299‑1 (MQ=255) aCCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATa > 1:114500/1‑300 (MQ=255) ccAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGTTTCGTTAGTCGCCGGTTACTACGGccacatcggaagtgcgtagg > 2:416829/1‑282 (MQ=255) agcagcAAATTCAGTGGTACTTGCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGc < 1:58302/301‑1 (MQ=255) agcaAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCaa > 1:222499/1‑216 (MQ=255) ccaAATGCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCtata < 2:132149/300‑1 (MQ=255) aCAAAAAAGAAAGCCCGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTa < 1:335314/301‑1 (MQ=255) cAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAATCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGTTTACGCCGGCATTAATTCGCAAATAAGTAGCTATACTTCGGCTTTTTGCTATGCTTTTTCttttt > 2:339908/1‑299 (MQ=255) aaaaaaaGAAAGCCGGACAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTAc < 2:39375/300‑1 (MQ=255) aaaaaaACTAACCGGAAAAGCGCCCAAAAAAAAGAGCCCACCGGCCAGCCTCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTCCCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACa < 2:114477/301‑1 (MQ=255) aTAGCCGGAAAAGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATAATTCGGATTTTTGCCATGCTATTTCTTTACATCTCTa > 1:203947/1‑300 (MQ=255) ccGGAAAAGCAACCAGCATAAATAGCAAACCTGCCAGCATCAGCTGTTGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCCTACGACCACTACCAGTATCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAATCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTaaaaca < 1:495676/301‑1 (MQ=255) aGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCgg < 2:254290/217‑1 (MQ=255) aGCGACCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCgg > 1:254361/1‑217 (MQ=255) aaCCAGCATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACg < 1:251488/300‑1 (MQ=255) cATAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACCGTTGATTTGTTAGTCGCCGGTTACGACGGCCTTAATGCGCAATGACGTCGCTATACTTCGGATTTTTGCTATTCTATTTCTTTAAATCTATAAAACAAAACATAACGAAAccc > 2:213480/1‑299 (MQ=255) tAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGcc > 1:554907/1‑256 (MQ=255) tAAAGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAG‑CCCCATACGACCACTACCATTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAATCAATCAACTTAGCTGAATTTACTTTTCTTTAACATTTGTTCCGTTAGTCTCCGGTTTACACGGCATTAATTCGCAAATAAGTCGATATACTTCGGATTTTTTATATGCTTTTTTTTTTCATCTTTCAAAAAAAAAAAAAAGaaaaacaat > 2:289966/1‑295 (MQ=255) tAAAGAGCAAACCGGCCAGCACCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAACTTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGcc < 2:554776/256‑1 (MQ=255) aaGAGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGATTTTACTTTTCTTTAACAGTTGATTCGTTAGTCGACgg > 1:506725/1‑204 (MQ=255) | ACTATCTTCGATTAACACCAGTACGCCAAAAATCGCTAAGGCGATCCCCGCCAATTGTTTGCCATGCAGTCGCTCCCCGAAAGTAAACGCGCCAAGCATGATAGTAAAAAACGCCTGTGCCTGTAACACCAGCGAAGCCAGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAAACGCACT > NC_000913/1620736‑1621318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |