New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 82407	61 (1.540)	3 (0.080)	3/250	NT	4.6%	coding (512/957 nt)	USA300HOU_0079	nickel (Ni2+)/peptide ABC superfamily ATP binding cassette transporter, membrane protein
	?	CP000730	= 82418	65 (1.710)					coding (523/957 nt)	USA300HOU_0079	nickel (Ni2+)/peptide ABC superfamily ATP binding cassette transporter, membrane protein

GCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATC  >  CP000730/82280‑82552                                                                                                                                           |                                                                                                                                       gCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTAATAAACCATTCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCtg                                                                                                                                      <  1:336285‑M2/141‑3 (MQ=255)       tgaacgcttGGACTCGTCCTAGTTATGACCCCAACGCCAGAATACTGGTTAGCTATTTTATTCATTTCTTATTTAGGCGCAAGTTGGCAATCGTTACCTTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCTAATc                                                                                                                                <  2:209911/133‑1 (MQ=255)       ggtagtCGTGGATTTGCCCAAGTTATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATc                                                                                                                                <  2:153481/136‑1 (MQ=255)          aTTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAGTCTTc                                                                                                                             >  1:267774/1‑141 (MQ=255)          aTTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTc                                                                                                                             >  1:39921/1‑141 (MQ=255)             cggggATTCGCCCAAGTGATGACCGCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTCGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTcaca                                                                                                                          <  2:137929/138‑1 (MQ=255)              gTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCCCaa                                                                                                                         >  2:28749/1‑141 (MQ=255)                ggATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAAtt                                                                                                                       >  1:155871/1‑141 (MQ=255)                    tCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAAttgttg                                                                                                                   <  2:264309/141‑1 (MQ=255)                     cGCCCAAGTGATGAACTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATtgttgt                                                                                                                  >  1:253569/1‑141 (MQ=255)                       cccAAGTGATGACCTCCATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTgttgttt                                                                                                                >  1:275005/1‑140 (MQ=255)                       cccAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATtgtggtga                                                                                                                >  1:245238/1‑139 (MQ=255)                          aaGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTGGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAATGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAg                                                                                                             >  2:314981/1‑141 (MQ=255)                          aaGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAg                                                                                                             <  1:383165/141‑1 (MQ=255)                           aGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCTTTCCATTTCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATTTTCACAATTGTTGTTATAGa                                                                                                            <  1:218874/141‑1 (MQ=255)                               atgaCCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTc                                                                                                                             >  1:369989/1‑120 (MQ=255)                               atgaCCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTc                                                                                                                             <  2:369989/120‑1 (MQ=255)                                    cTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCa                                                                                                   <  1:357726/141‑1 (MQ=255)                                      taaTGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCata                                                                                                 <  1:14846/140‑1 (MQ=255)                                       aaTGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAGCACAAAGTGTtgccatgaatcactacctacaaatg                                                                                                               >  2:260433‑M2/1‑101 (MQ=255)                                       aaTGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAGCACAAAGTGTtgccatgaatcactacctacaaatg                                                                                                               <  1:260433‑M2/126‑26 (MQ=255)                                            caaaaTACTGGTTATCTATTTTATTCCTTTATTCTTTAGGCGTACGGTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTAt                                                                                           <  1:61333/138‑1 (MQ=255)                                            cAGAATACTGGTTCGCTATTTTCTTCATTTATTATTTCGGCGTACGTTGGCAATTCTTACCGTTTGTAATTAGTTATTCATGGCAACACTTTGTGCTTCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTAt                                                                                           <  2:267774/141‑1 (MQ=255)                                            cAGAATACTGGTTAGCTATTTTATTAATTTATTATTTAGGTGTACGTTTGCAATTTTGACCATTTGTATCTAATTATGCATGGCAACACTTTTTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTAt                                                                                           <  2:39921/141‑1 (MQ=255)                                            cAGAATACGGGTTAGCTATTTTATTCATTGATTATTGAGGCGTATGTTGGCAACTGTTACCATTTGTAGGTAGTGATTCATGGCAATACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTAt                                                                                           <  1:61372/141‑1 (MQ=255)                                              gAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATtg                                                                                         <  2:147481/141‑1 (MQ=255)                                                     gggtAGCTATTTTATCCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAg                                                                                  <  1:30056/138‑1 (MQ=255)                                                       ttAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGca                                                                                >  1:404061/1‑141 (MQ=255)                                                       ttAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGca                                                                                >  1:309118/1‑141 (MQ=255)                                                        tatcTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAATGATTCATGGCAACACTTTGTGTTGCCAATCTTCACAATTTTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGcac                                                                               <  2:18649/138‑1 (MQ=255)                                                        tAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGcac                                                                               >  1:277637/1‑141 (MQ=255)                                                               tttATTTTTTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGAt                                                                        <  2:191560/141‑1 (MQ=255)                                                               tttATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGAt                                                                        >  1:275599/1‑141 (MQ=255)                                                               tttATTCATTTATTATTTAGGCGCACGTTTGCAATTGTTACCCTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACTATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGAt                                                                        <  2:340733/141‑1 (MQ=255)                                                                  tttCTTTTTTTATTTTGGGTTACGTTGGTAATTGTTACCATTTGTAGGTAGTGATTCATGGAAACACTTTGTGCTGACAAGCTTCAAAATTTTTGTTATAGAAGGGTGTCATATCTTATTGATTACAGCACATCGGATTac                                                                     <  2:189462/140‑1 (MQ=255)                                                                  aTTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACGCTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTac                                                                     >  2:187910/1‑141 (MQ=255)                                                                  aTTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAAGCGTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTac                                                                     >  1:107252/1‑141 (MQ=255)                                                                   ttCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTTATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTaca                                                                    <  2:347871/141‑1 (MQ=255)                                                                       tttATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGGGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACaaa                                                                >  1:360251/1‑141 (MQ=255)                                                                          attattTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGt                                                             <  1:161480/141‑1 (MQ=255)                                                                               ttAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGTCACACTTTGTGCTGTCAATCTTCACAATGGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGAt                                                        <  2:277969/141‑1 (MQ=255)                                                                               ttAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGAt                                                        >  2:141574/1‑141 (MQ=255)                                                                                 aGGCGTTCGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCa                                                      <  1:215561/141‑1 (MQ=255)                                                                                 aGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCa                                                      >  2:35483/1‑141 (MQ=255)                                                                                  ggCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCCCATCTGATTACACAAACGTTAGATCaa                                                     >  2:355678/1‑141 (MQ=255)                                                                                  ggCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACCAACGTTAGATCaa                                                     >  1:76667/1‑141 (MQ=255)                                                                                         gTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGt                                              >  2:346440/1‑141 (MQ=255)                                                                                            ggCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAGGATGCGTATc                                           >  2:288579/1‑141 (MQ=255)                                                                                             gCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGCTCAAGATGCGTATCa                                          >  2:145650/1‑141 (MQ=255)                                                                                             gCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGAGCAAGATGCGTATCa                                          >  2:38868/1‑141 (MQ=255)                                                                                               aaTTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAAc                                        <  2:366961/141‑1 (MQ=255)                                                                                                aTTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACt                                       <  2:336285/141‑1 (MQ=255)                                                                                                  tGTTCCCATTTGGAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGTACATCTGATTAAACTCATCTTAGATCAAGATGCGTATCAACTgg                                     <  1:110171/141‑1 (MQ=255)                                                                                                  tGTTACCCTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTgg                                     <  2:72070/141‑1 (MQ=255)                                                                                                     tACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATCGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACTTCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGgcgc                                  <  2:253569/141‑1 (MQ=255)                                                                                                        cATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGt                               >  1:371721/1‑141 (MQ=255)                                                                                                         aTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGtt                              >  1:346808/1‑141 (MQ=255)                                                                                                         aTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGtt                              <  2:437243/141‑1 (MQ=255)                                                                                                                ggtagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATACGTATCAACTGGCGCAGTTAAGACAt                       >  2:80739/1‑141 (MQ=255)                                                                                                                ggtagTGATTCATGACAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGAGGCATAACTTATTGATTACATCAAATCTGATTACACAAACGTTAGTACAAAATGCGAATCAAATGGAGAAGGTAAGActt                       >  2:418948/1‑139 (MQ=255)                                                                                                                         tCATGGCAAGCAGTTGTGCTGCCAATCTGGACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTa              <  2:57169/141‑1 (MQ=255)                                                                                                                          cATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTaa             >  1:404345/1‑141 (MQ=255)                                                                                                                           aTGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTATCGTTaaa            >  2:408317/1‑141 (MQ=255)                                                                                                                            tGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACGTTTTTCGTTaaaa           >  2:188596/1‑141 (MQ=255)                                                                                                                            tGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTaaaa           >  2:363053/1‑141 (MQ=255)                                                                                                                              gCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACAtttttttttttaatt         >  2:237084/1‑131 (MQ=255)                                                                                                                              gCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAgc         >  2:237026/1‑141 (MQ=255)                                                                                                                              gCAACACTTTGTGCTGCCAATCTTAACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAgc         >  1:337342/1‑141 (MQ=255)                                                                                                                                 acacTTTGTGCGGTCAGTCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATGTTTCGTTAAAAGcgcg      <  2:231821/141‑1 (MQ=255)                                                                                                                                  cattttGTCCTTCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGt     <  2:373926/138‑1 (MQ=255)                                                                                                                                    caaagtgtTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCCCATCTGAGTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTat   >  2:4147/5‑141 (MQ=255)                                                                                                                                     tttGTGCtgccatgaatcactacctacaaatggtaacaattgccaacgtacgcctaaataataaatgaatcaagttgctaaccagtattctggcattgaggtcatcacttgggcgaatccacgaattccattagcgtaacg  <  2:395799‑M2/141‑135 (MQ=255)                                                                                                                                           |                                                                                                                                       GCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATC  >  CP000730/82280‑82552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.