Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 665,392 T→G 100% L79* (TTA→TGA)  USA300HOU_0608 → possible acetytransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730665,3920TG100.0% 265.9 / NA 79L79* (TTA→TGA) USA300HOU_0608possible acetytransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (39/40);  total (39/40)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

CAACAGTTAATCACTTGTTAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATTATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGATAATAAAAATGAAGA  >  CP000730/665257‑665527
                                                                                                                                       |                                                                                                                                       
caacaGTTAATCACTTGTTAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAGTGACATCGTTGGCTTTGCTAACTTTATTTACGGGGAAGAATGATAtt                                                                                                                                    >  2:174957/1‑141 (MQ=255)
  acaGTTAATCACTTGTTAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGAGAAGAATGATATTTa                                                                                                                                  >  2:320940/1‑141 (MQ=255)
      ttAATCACTTGTTAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGGATGATATGTATCAg                                                                                                                              >  2:138813/1‑141 (MQ=255)
          tCACTTGTTAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCa                                                                                                                          <  2:39394/141‑1 (MQ=255)
           cACTTGTTAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAGCTTTATTTACGGTGAAGAATGATATTTATCAGCTCAt                                                                                                                         <  1:441465/141‑1 (MQ=255)
             cTTGTTAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATCTTTATTAGCTCAtga                                                                                                                       >  2:167826/1‑139 (MQ=255)
                 ttAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTTAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATGATGtt                                                                                                                   >  1:598144/1‑141 (MQ=255)
                 ttAGAAGCTTCATATAATAAACATCGTTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTTAAGAAGGTAATGACATCGTTGGCTTTGCTAAATTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATAtt                                                                                                                   >  1:367829/1‑141 (MQ=255)
                  tAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTa                                                                                                                  <  1:5841/141‑1 (MQ=255)
                   aGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTaa                                                                                                                 <  1:524432/141‑1 (MQ=255)
                     aaGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGGCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATGTTTATCAGCTCATTATGTTAAAc                                                                                                               >  1:273325/1‑141 (MQ=255)
                       acgtCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACTGTGAAGAATGATATTTATCAGCTCATTCTGTTTAACCa                                                                                                             <  2:464369/138‑1 (MQ=255)
                           tatatAATGAACATCACTTAAAGAAAAGACTTCAAGAACAATTATTAGTACTCGTTAAAGAAGGTAATGACATCGTTGGCTTTGCCAACTTTATTTACGGTGACTAATGATATTTATCAGCTCATTATGTTAAACCAGAAt                                                                                                         <  1:301402/140‑1 (MQ=255)
                             tataATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGGAGAATGATATTTATTCGCTCATTATGTTAAACCAGGATCg                                                                                                       >  1:28614/1‑141 (MQ=255)
                             tataATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCg                                                                                                       >  1:680848/1‑141 (MQ=255)
                              ataATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGc                                                                                                      <  2:435134/141‑1 (MQ=255)
                                aaTGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCaa                                                                                                    <  2:74345/141‑1 (MQ=255)
                                  tGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACa                                                                                                  <  2:580867/141‑1 (MQ=255)
                                    aaCATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTCAACCAGAATCGCAACATa                                                                                                <  2:100619/141‑1 (MQ=255)
                                     aCATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATAc                                                                                               >  1:455411/1‑141 (MQ=255)
                                        tcatTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGCTGCATGAGATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAgg                                                                                            >  1:357421/1‑141 (MQ=255)
                                        tcatTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAgg                                                                                            >  1:156412/1‑141 (MQ=255)
                                           tttAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACCCACAGGGTa                                                                                         >  1:744017/1‑141 (MQ=255)
                                            ttAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTAt                                                                                        <  1:123414/141‑1 (MQ=255)
                                            ttAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTAt                                                                                        <  1:29158/141‑1 (MQ=255)
                                             tAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATg                                                                                       <  2:751917/141‑1 (MQ=255)
                                                     agaCTTCACGTACAATTTTGCTTAGTTGTTTCAGAAGGTAATGACATCGTTGGCTTTGCGAACGTTATTTACGGTGAAGAATGAGATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCa                                                                               <  2:396231/141‑1 (MQ=255)
                                                     agaCTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCa                                                                               >  1:570593/1‑141 (MQ=255)
                                                       aCTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCAtt                                                                             >  1:321091/1‑141 (MQ=255)
                                                        cTTCAAGCACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTg                                                                            <  2:619985/141‑1 (MQ=255)
                                                         ctCAAGAACAATTATTTTTAGTCGTTGAAGAAGGTAATGACATCGTTTGCTTTGCTAACTTTCTTTACGGTGAAGAATGTTATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGt                                                                           <  2:165195/140‑1 (MQ=255)
                                                             aGAACATTTATTCCTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTAGCTAACTTTATTTCCGGTGAAGAATGATATTTATCAGCTCATTATGTTCAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTaaa                                                                       <  2:331210/141‑1 (MQ=255)
                                                             aGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTaaa                                                                       >  1:659420/1‑141 (MQ=255)
                                                                  aaTTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAg                                                                  >  1:148041/1‑141 (MQ=255)
                                                                   attattCTTAGTCGTTGAAGAAGGTAATGACATTGTTGGCTTTGCTACCTTTATTGACGGTGAAGAATGATAGTTATCAGCTCATGACGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAgg                                                                 >  2:417346/1‑141 (MQ=255)
                                                                   attattCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAgg                                                                 >  2:304029/1‑141 (MQ=255)
                                                                      attCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGGGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGAtt                                                              <  2:2661/141‑1 (MQ=255)
                                                                           tAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTGAAATGAAGGATTATCAc                                                         >  1:613069/1‑141 (MQ=255)
                                                                                gTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGtttt                                                    <  2:9145/141‑1 (MQ=255)
                                                                                 ttGAAGAAGGTAATGACATCGTTGGCTGTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTg                                                   <  1:691250/141‑1 (MQ=255)
                                                                                   gagtaagGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGaa                                                 >  2:351085/5‑141 (MQ=255)
                                                                                      gaagGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGAt                                              <  2:41019/141‑1 (MQ=255)
                                                                                       aagGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTCATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATa                                             >  1:505059/1‑141 (MQ=255)
                                                                                       aagGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATCTATCAGCACATTATGTTAAACCAGAATCGCAACCTACAGTTTATGGTACAGCATTCTTAAATGAAGGATTATCAcactctcatcctc                                             >  2:294902/1‑129 (MQ=255)
                                                                                          gTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGGTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAAt                                          >  1:421016/1‑141 (MQ=255)
                                                                                            taggccATCGTTGGCGTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAAttt                                        <  2:167970/136‑1 (MQ=255)
                                                                                            aaTGACATCGTTGGCTTTGCTAACTTTATTTACGATGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTCACACGTTTTGAAGATAAAttt                                        >  2:327809/1‑141 (MQ=255)
                                                                                             aTGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTg                                       <  1:457364/141‑1 (MQ=255)
                                                                                              tGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGa                                      <  2:18868/141‑1 (MQ=255)
                                                                                              tGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGa                                      <  2:18854/141‑1 (MQ=255)
                                                                                               gACATCGTTGGCTTTGCTAACTTTCTTTACGGTGAAGAATGCTATTTCTCAGCTCATTACGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAGATGAAGGATTATCCCGTTTTGCAAATAAATTTGaa                                     >  2:173175/1‑141 (MQ=255)
                                                                                               gACATCGTTGGCTGTGCTAACGTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATCAATTTGaa                                     >  2:181196/1‑141 (MQ=255)
                                                                                                  aTCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTGTGAAGATAAATTTGAAGgt                                  <  1:402052/141‑1 (MQ=255)
                                                                                                   tCGTTGGCTTTGCTAACTTCATTTACGGTGAAGGATGATATTTATCAGCGCATTATGTTAAACCAGAATCGCAACATACAGGACATGGCACCGCCAAGCAAAATGAAGGATTATCACGTAATAAAGATAAATTTGAAggcg                                 >  2:414317/1‑139 (MQ=255)
                                                                                                          cTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACtt                          <  2:165454/141‑1 (MQ=255)
                                                                                                          cTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACtt                          >  1:654259/1‑141 (MQ=255)
                                                                                                          cTTTGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACtt                          <  1:263362/141‑1 (MQ=255)
                                                                                                          cTTTGCTAACTTTATTTAAGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACtt                          <  2:190923/141‑1 (MQ=255)
                                                                                                          cTTGGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACtt                          <  2:165490/141‑1 (MQ=255)
                                                                                                            ttGCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAg                        >  2:467404/1‑141 (MQ=255)
                                                                                                              gCTAACTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGaa                      <  2:357421/141‑1 (MQ=255)
                                                                                                                 aaCTTTATTTACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTa                   >  2:306031/1‑141 (MQ=255)
                                                                                                                   ccttatttaCCGGGAAGAATGATTCTTATCAGCTCATTATGTTAAACTAGAATCTCAACCAACAGGTTATGGTAAAGCATTGTTAAATGAAGGAGTATCAAGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGgaga                 <  2:115606/139‑1 (MQ=255)
                                                                                                                   cTTTTTTCACGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGa                 <  2:410783/141‑1 (MQ=255)
                                                                                                                    tttatttaCGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGat                <  1:283052/141‑1 (MQ=255)
                                                                                                                    tttatttaCGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGat                >  1:222091/1‑141 (MQ=255)
                                                                                                                    tttatttaCGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGat                >  1:733554/1‑141 (MQ=255)
                                                                                                                    tttatttaCGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGat                <  2:455411/141‑1 (MQ=255)
                                                                                                                       atttaCGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGataat             <  1:264109/141‑1 (MQ=255)
                                                                                                                        tttaCGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGataata            <  2:680848/141‑1 (MQ=255)
                                                                                                                        tttaCGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGataata            >  2:591362/1‑141 (MQ=255)
                                                                                                                          taCGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGATAATaaa          >  2:130865/1‑141 (MQ=255)
                                                                                                                          taCGGTGAAGAATGATATTAATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGATAATaaa          >  1:455305/1‑141 (MQ=255)
                                                                                                                            cGGTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGATAATaaaaa        >  1:507755/1‑141 (MQ=255)
                                                                                                                             ggTGAAGAATGATATTTATCAGCTCATTATGTTCAACCAGAATCGCAACATACAGGTTATGGTTCAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGACGGTGTTTACTTGGAAGTAGataatggtaat       >  2:576748/1‑135 (MQ=255)
                                                                                                                             ggTGAAGAATGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTGTGGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGATAATAAAAAt       >  1:433117/1‑141 (MQ=255)
                                                                                                                                gaagaaTGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGATAATAAAAATgaa    <  1:722806/141‑1 (MQ=255)
                                                                                                                                 aagaaTGATATTTATCAGCTCATTATGTCAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGCTAAATTTGAAGGTGTTTACTTAGAAGTAGATAATAAAAATgaag   <  1:430392/141‑1 (MQ=255)
                                                                                                                                  agaaTGATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGATAATAAAAATgaaga  <  1:646258/141‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                       
CAACAGTTAATCACTTGTTAGAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTCGTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATTATATTTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTAAATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGATAATAAAAATGAAGA  >  CP000730/665257‑665527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: