Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 96,144 A→G 8.6% intergenic (+660/+819) USA300HOU_0093 → / ← USA300HOU_0095 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP00073096,1440AG 8.6% 188.9 / 7.0 68intergenic (+660/+819)USA300HOU_0093/USA300HOU_0095hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (36/26);  new base G (3/3);  total (39/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.21e-01

TGAAAATTATGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATGGG  >  CP000730/96008‑96284
                                                                                                                                         |                                                                                                                                            
tggaaaTTATTGATTTAGGTGAAGATTATTTTAGGAAACATAAAACCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGaagaaa                                                                                                                                          <  2:153303/138‑1 (MQ=255)
      ttATGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAata                                                                                                                                    <  2:109565/141‑1 (MQ=255)
       tATGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGTTTGTTGAAGAAAGAAatat                                                                                                                                   <  1:430448/141‑1 (MQ=255)
        aTGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAAtata                                                                                                                                  <  2:317057/141‑1 (MQ=255)
        aTGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAAtata                                                                                                                                  <  2:583131/141‑1 (MQ=255)
          gTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAAc                                                                                                                                >  2:707896/1‑141 (MQ=255)
              ttAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTc                                                                                                                            <  1:563493/141‑1 (MQ=255)
              ttAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTc                                                                                                                            <  1:648448/141‑1 (MQ=255)
               tAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGATGAAGAAAGAAATATAACAGTCa                                                                                                                           >  1:652178/1‑141 (MQ=255)
                  cTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCaatt                                                                                                                        >  2:398090/1‑141 (MQ=255)
                  cTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCaatt                                                                                                                        >  1:236682/1‑141 (MQ=255)
                  cTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTATTAAAGAAAGAAATATAACAGGCagtt                                                                                                                        >  1:649287/1‑141 (MQ=255)
                      aGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCaattataa                                                                                                                    >  2:132860/1‑141 (MQ=255)
                         gtattTTAGGATACATAAAGTCGGTTCTAACGCTAAAGTGATATTTGCAGCGCCAAAAGATGATT‑TATTTGACGTAGGAAAATATAATAAAGAATTCGAAAAGATGGTTGAAGAAAGAAATATAACAGTCaattttaatta                                                                                                                 >  2:777099/2‑141 (MQ=255)
                           attTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAattataattata                                                                                                               >  2:641531/1‑141 (MQ=255)
                           attTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAataataaatata                                                                                                               >  2:752867/1‑141 (MQ=255)
                                   aaaCATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCttgtt                                                                                                       >  1:1722/1‑141 (MQ=255)
                                      cATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGaa                                                                                                    >  1:259763/1‑141 (MQ=255)
                                          aaaTCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCg                                                                                                >  2:447029/1‑141 (MQ=255)
                                           aaTCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGa                                                                                               >  2:266578/1‑141 (MQ=255)
                                               cGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGt                                                                                           >  2:276051/1‑141 (MQ=255)
                                                        gCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCAACGGTGACaaaaaa                                                                                  >  2:306889/1‑141 (MQ=255)
                                                              gtgATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCt                                                                            <  1:203281/141‑1 (MQ=255)
                                                                   atatGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAAGCGACGGTGACAAAAAAGTGGCTACAtt                                                                       <  1:799913/141‑1 (MQ=255)
                                                                       gCAACGCCAAAAGATGCTTAAATCTTATGTA‑TAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGaa                                                                   <  2:809644/141‑1 (MQ=255)
                                                                       gCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAGAGTGGCTACATTCGaa                                                                   <  1:481783/141‑1 (MQ=255)
                                                                       gCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGaa                                                                   <  1:5363/141‑1 (MQ=255)
                                                                        cAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAAc                                                                  >  2:598358/1‑141 (MQ=255)
                                                                        cAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGCCGACCAAAAAAGGGCTACATTCGacc                                                                  >  2:487433/1‑139 (MQ=255)
                                                                        cAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAAAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAAc                                                                  >  2:597110/1‑141 (MQ=255)
                                                                              cAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACTGTGACAAAAAAGTGGCTACATTCGAACATATCa                                                            >  1:237275/1‑141 (MQ=255)
                                                                               aaaaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGCCAAAAAAGTGGCTACATTCGAACATAGCaa                                                           >  1:78108/1‑141 (MQ=255)
                                                                               aaaaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCaa                                                           >  2:756743/1‑141 (MQ=255)
                                                                                 aaGATGCTT‑TATTTGACGTATGAAAATATAATAAAGAATTAGAAAGGATTGTTGAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAg                                                         >  1:490299/1‑141 (MQ=255)
                                                                                 aaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAg                                                         >  1:513926/1‑141 (MQ=255)
                                                                                 aaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAg                                                         >  2:712226/1‑141 (MQ=255)
                                                                                 aaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAg                                                         >  1:607493/1‑141 (MQ=255)
                                                                                   gATGCTT‑TATTTGACGTAGGAAAATATAATAAATAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCATAGCa                                                       <  1:550571/141‑1 (MQ=255)
                                                                                   gATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCa                                                       <  1:99927/141‑1 (MQ=255)
                                                                                       cTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGTCAAAAAAGTGGCTACATTCGACCATATCAAAGCATACg                                                   <  1:450741/141‑1 (MQ=255)
                                                                                       cTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAAAATAGTTGAAATCGAGGATGACAAAAAAATGGTTCCTAGCTAACATATCAAAGCATACg                                                   >  2:364662/1‑141 (MQ=255)
                                                                                        tt‑tATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGa                                                  <  1:310965/141‑1 (MQ=255)
                                                                                            aTTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAg                                               >  1:719819/1‑141 (MQ=255)
                                                                                            aTTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAg                                               >  1:396075/1‑141 (MQ=255)
                                                                                                  cGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCACTTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATAAAAGCATACGATAGaaaaaa                                         >  2:159438/1‑140 (MQ=255)
                                                                                                   gTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATCATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACa                                        <  1:679666/141‑1 (MQ=255)
                                                                                                   gTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACa                                        <  1:347452/141‑1 (MQ=255)
                                                                                                   gTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACa                                        <  1:617600/141‑1 (MQ=255)
                                                                                                    gaGGAAAATATAATAAAGAAGTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTGGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATAGCAAAGCATACGATAGAAAAACaa                                       <  2:763388/140‑1 (MQ=255)
                                                                                                      ggAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACAGTGAAAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATa                                     <  2:434916/141‑1 (MQ=255)
                                                                                                       gAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATaa                                    >  2:78713/1‑141 (MQ=255)
                                                                                                                ataaAGAATTAGAAAGGATTGTTGAAGAAAGAAATATACCAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGCAAAACAATAAGTTATGata                           >  1:196242/1‑141 (MQ=255)
                                                                                                                ataaAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGata                           >  2:365384/1‑141 (MQ=255)
                                                                                                                ataaAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTAAGata                           >  2:238426/1‑141 (MQ=255)
                                                                                                                ataaAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTGAAGata                           >  1:357416/1‑141 (MQ=255)
                                                                                                                   aaGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGt                        <  1:766868/141‑1 (MQ=255)
                                                                                                                   aaGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCCTGTGCGTAACGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGt                        <  1:793576/141‑1 (MQ=255)
                                                                                                                        ttAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACAt                   >  1:476284/1‑141 (MQ=255)
                                                                                                                         tataagggATTGTAGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATg                  <  1:702653/135‑1 (MQ=255)
                                                                                                                         tAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATg                  <  1:464951/141‑1 (MQ=255)
                                                                                                                         aaaaaaCGAATGTCGAAGAAAGAACTATAGCAGTCAATTATAATTATACCCCAGTGGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATg                  <  1:626800/138‑1 (MQ=255)
                                                                                                                                 aTTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAACCGAAGGTGACAAAAAAGTGGCTACAGTCGAACATATCCAAGCACACGAAAGAAAAACAATAAGTTAGGATATGTTTAATATAAaacca          >  2:19272/1‑141 (MQ=255)
                                                                                                                                  ttgttgAAGAAAGAAATATAACAGCCAATTATAATTATAACCTTGGTGAAATCGACGGTGACAAAAAAGTGGCTACCTCCGCACATATGCAAGCATACGATAAAAAAACAATAAGTTATGATATGTTACATGTAAcaccac         <  2:171060/141‑1 (MQ=255)
                                                                                                                                   tgttgAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACaccacc        <  2:513926/141‑1 (MQ=255)
                                                                                                                                   tgttgAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACaccacc        <  2:490299/141‑1 (MQ=255)
                                                                                                                                   tgttgAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACaccacc        <  1:712226/141‑1 (MQ=255)
                                                                                                                                    gttgAAGAAAGAAAGATAACAGTCACTCAGGACTATAACCTTGTTGAAATCGACGGTGGCAAGAAAGTGGCTACATTCGCACATATCAAAGCATACGATAGAAAACCAATAAGTTATGATATGTTACATGTAGAACCACCt       >  2:336866/1‑141 (MQ=255)
                                                                                                                                     ttgAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTa      >  2:797924/1‑141 (MQ=255)
                                                                                                                                     ttgAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGAGACAAAAAAGTGGCTACATTCGAACATATCACAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTa      >  2:446657/1‑141 (MQ=255)
                                                                                                                                       gaagaaAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATg    <  2:461154/141‑1 (MQ=255)
                                                                                                                                       aaagaaagaAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGAATAAAAAAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATg    <  2:764586/140‑1 (MQ=255)
                                                                                                                                       aaagaaagaAATATAACAGTCAATTATAATGATAACCTTATTGAACTCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATg    <  2:329331/140‑1 (MQ=255)
                                                                                                                                        aagaaagaAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCAACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATgg   <  1:306889/141‑1 (MQ=255)
                                                                                                                                         agaaagaaATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATggg  <  2:607493/141‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                            
TGAAAATTATGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATGGG  >  CP000730/96008‑96284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑