Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	607,884	G→A	100%	R209* (CGA→TGA)	USA300HOU_0550 ←	deoxynucleoside kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	607,884	0	G	A	100.0%	203.1 / NA	69	R209* (CGA→TGA)	USA300HOU_0550	deoxynucleoside kinase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (42/27);  total (42/27)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

GTATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCA  >  CP000730/607746‑608019                                                                                                                                           |                                                                                                                                         gtATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAg                                                                                                                                        >  1:563519/1‑141 (MQ=255)     atGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACTTTAATTATACGGCGTTTTATGGTGTTGCTACTTGTCGATATGTTTGAACCATTCAAGCAAt                                                                                                                                    <  2:369920/141‑1 (MQ=255)       gtgAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAAttt                                                                                                                                  >  2:133528/1‑141 (MQ=255)       gtgAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAAttt                                                                                                                                  >  2:669661/1‑141 (MQ=255)       gtgAATTAATGTATCCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTATTTGTCGATATGTTTGAATAATTCAAGCAtttt                                                                                                                                  >  2:549536/1‑141 (MQ=255)         gAATTAATGTATTCGCTAGAATTGATAAAATAATCGATAATATCTATGGAATATCCATTGAATATAAACAGATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGCATAATTCAAGCAAtttat                                                                                                                                >  2:198561/1‑139 (MQ=255)         gAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTg                                                                                                                                >  2:397241/1‑141 (MQ=255)           aTTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTATTCTTTTATCTTGTATCTCCTGGTCGATATGATTGAATCATTCAGGCAAGTTTGtt                                                                                                                              >  1:168173/1‑141 (MQ=255)              aaTGTATTCGATAGAATTGATAAAATAATCGTTAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTAt                                                                                                                           <  1:341697/141‑1 (MQ=255)              aaTGTATTCGATAGAATTGATAAAATAATCGATAATATGTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTATTATCGTGTATCTACTTGTCGATATGTTTGAATTCTTCAAGCAATTTTGTTTAt                                                                                                                           <  1:526056/141‑1 (MQ=255)              aaTGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTAt                                                                                                                           <  2:589760/141‑1 (MQ=255)               aTGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTCCTTGTCAATCTGTTTGACTAATTCATGCAATCTTGTTTATc                                                                                                                          >  2:768260/1‑141 (MQ=255)               aTGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATc                                                                                                                          <  1:115199/141‑1 (MQ=255)                      cGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGAt                                                                                                                   >  2:591207/1‑141 (MQ=255)                      cGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGAt                                                                                                                   >  1:650221/1‑141 (MQ=255)                      cGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTAAGTCTTTAGTCTTTTATCGTGTATCTAATTGTAGATATGTGTGAATAATTCAAGCAATTTTGTTTATAATATGAt                                                                                                                   >  2:260267/1‑141 (MQ=255)                       gATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGAtt                                                                                                                  >  2:507890/1‑141 (MQ=255)                          aGAATTGATAAAATAATCGATAATAACTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTaa                                                                                                               <  2:448671/141‑1 (MQ=255)                           gAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATACACATCTGCGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGGTATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTaaa                                                                                                              >  1:795913/1‑141 (MQ=255)                             aTTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGa                                                                                                            <  2:197165/141‑1 (MQ=255)                              ttGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGTATTTAAAGAt                                                                                                           >  1:629713/1‑141 (MQ=255)                              ttGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAggt                                                                                                           >  1:168780/1‑139 (MQ=255)                                gATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTc                                                                                                         <  1:582170/141‑1 (MQ=255)                                      ataatCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTc                                                                                                   <  2:695620/141‑1 (MQ=255)                                          tCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTa                                                                                               <  1:109397/141‑1 (MQ=255)                                              taataTCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATCTGTTTGAATAATTCAAGCCATTTTGTTTATAATAAGATTTGAACATTCGTGGTCCTTATGGa                                                                                           >  2:715402/1‑141 (MQ=255)                                              taataTCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTATTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTTAACCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTCTGGa                                                                                           >  2:203547/1‑141 (MQ=255)                                                        ggAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑Tc                                                                                >  2:576374/1‑141 (MQ=255)                                                        ggAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑Tc                                                                                <  2:195188/141‑1 (MQ=255)                                                              taCATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAat                                                                          >  1:605343/1‑141 (MQ=255)                                                                  ttGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTg                                                                      >  2:636092/1‑141 (MQ=255)                                                                  ttGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGAGTCCTTATGGATATCATAT‑TCATTAATATTg                                                                      >  1:230011/1‑141 (MQ=255)                                                                    gAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGAt                                                                    >  1:92700/1‑141 (MQ=255)                                                                       tataAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACg                                                                 >  1:692816/1‑141 (MQ=255)                                                                       tataAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACg                                                                 >  2:739973/1‑141 (MQ=255)                                                                        ataAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGt                                                                <  2:563519/141‑1 (MQ=255)                                                                           aaCATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACa                                                             >  2:160491/1‑141 (MQ=255)                                                                           aaCATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACa                                                             >  1:450525/1‑141 (MQ=255)                                                                              atatACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGAtcccccccacc                                                          >  1:786169/1‑131 (MQ=255)                                                                                ataCGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTgg                                                        <  2:397753/141‑1 (MQ=255)                                                                                   cGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGAAATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACa                                                     <  2:413266/141‑1 (MQ=255)                                                                                     cTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATg                                                   <  2:724606/141‑1 (MQ=255)                                                                                        tGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAAATTTGTATATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCAt                                                <  1:793678/141‑1 (MQ=255)                                                                                             ttAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAg                                           <  1:133528/141‑1 (MQ=255)                                                                                                  cTTTTATCGTGTATCTACTTGTCGATCTGTTTGAATAATTCAAGATATTTTGTTTATCATAGGATTTAAAGATTCGAGGCACTTATGAATATCATAT‑TCATTACTATTGATACGTACAACTGAACATGCATTAAAgtcatt                                      >  2:303509/1‑136 (MQ=255)                                                                                                  cTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCACGCAATTTTACTTATCATAGGATGTAAAGATTCGGAATACTTATAGATA‑AATATCCCACAAAAATTTGTACGTACAGCTGGAGATGCATTAATGCCAtt                                      >  2:83631/1‑141 (MQ=255)                                                                                                  cTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCCATTTTGTGTATCATAGGATTTAAAGATTCGGGGTCGTTCTGGATATAATAT‑TCATTAATATTGATACGTACAACTGGAAATACATTAAAgtcatt                                      >  2:746291/1‑136 (MQ=255)                                                                                                  cTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTAtt                                      >  2:693997/1‑141 (MQ=255)                                                                                                  cTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGGTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATCACATAT‑TCATTAATATTGATACGTACAACTGGAGAGGCATTAAAGCTAtt                                      >  2:632833/1‑141 (MQ=255)                                                                                                     ttATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAAt                                   >  1:211717/1‑141 (MQ=255)                                                                                                       atagtgtATCTACTTGTCGAGATTGTTTAATACTTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATTGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCAGTAAAGCTATTAATcc                                 <  1:103987/138‑1 (MQ=255)                                                                                                         cGTGTATCTACTTGTCGATATTTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCaa                               <  1:137722/141‑1 (MQ=255)                                                                                                            gtATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATct                            >  1:425376/1‑140 (MQ=255)                                                                                                            gtATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCg                            >  1:693037/1‑141 (MQ=255)                                                                                                                    ttGTCGATATGTTTGAATAATTCAAGCACTTTTGTTTATCATAGGATTTAAAGATTCGTGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTATTCTAATCGTAATAGCg                    >  2:182980/1‑141 (MQ=255)                                                                                                                    ttGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCg                    <  1:203547/141‑1 (MQ=255)                                                                                                                    ttGGCGATATGGTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCg                    <  1:715402/141‑1 (MQ=255)                                                                                                                         gATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGCTTTATAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTTATTCGTTACACTAGACATGCATTAAAGCTATTAATCCAATAGTAGTAACGTTTaa               >  1:161778/1‑141 (MQ=255)                                                                                                                         gATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTaa               >  1:551048/1‑141 (MQ=255)                                                                                                                             tGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATTGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAg           <  2:230011/141‑1 (MQ=255)                                                                                                                             tGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAg           <  1:636092/141‑1 (MQ=255)                                                                                                                               tttGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATATCGTTTAAATAGCt         >  2:270026/1‑141 (MQ=255)                                                                                                                                   aataatTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTGATAGCGTTTAAATAGCttttt     >  2:378368/1‑141 (MQ=255)                                                                                                                                   aataatTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCCTACCGTTTCACCACCttttt     >  2:655188/1‑141 (MQ=255)                                                                                                                                   aataatTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCAGTAATATTGATACGTACAACCGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTCAATAGCttttt     >  2:445717/1‑141 (MQ=255)                                                                                                                                     tgatTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTcc   <  1:581236/139‑1 (MQ=255)                                                                                                                                     taatTCAAGCAATTTTGTTTAGCATAGGATTTAAAGATTCGGGGTCCTTAAGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTcc   <  1:174784/141‑1 (MQ=255)                                                                                                                                      aatTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCa  <  1:653993/141‑1 (MQ=255)                                                                                                                                      aatTCAAGCAATTCTGCTCATCATAGGATTTAAAGATACGGGGTCCTGCTAGATATCAGAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCa  <  1:710688/141‑1 (MQ=255)                                                                                                                                           |                                                                                                                                         GTATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAT‑TCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCA  >  CP000730/607746‑608019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑