| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 984,359 | A→G | 5.9% | K101E (AAA→GAA) | eap → | possible extracellular adherence protein Eap |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 984,359 | 0 | A | G | 5.9% | 244.8 / 2.6 | 82 | K101E (AAA→GAA) | eap | possible extracellular adherence protein Eap |
| Reads supporting (aligned to +/- strand): ref base A (42/34); new base G (2/3); total (45/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGATGGCATTATGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAATGTAAAAACTAAATAAACACT > CP000730/984220‑984498 | aGATGGCATTATGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCaaa > 2:473377/1‑141 (MQ=255)aGATGGCATTATGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCaaa > 2:570096/1‑141 (MQ=255) aTGGCATTATGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAAt > 1:155964/1‑141 (MQ=255) gaaTTATGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTg < 1:341563/139‑1 (MQ=255) gCATTATGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTg > 1:649217/1‑141 (MQ=255) gCATTATGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTg > 2:68993/1‑141 (MQ=255) gCATTATGGCCTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTg < 1:49005/141‑1 (MQ=255) tATGGTTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGt < 2:722962/141‑1 (MQ=255) tATGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGt < 1:762894/141‑1 (MQ=255) tGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGttt < 1:433521/141‑1 (MQ=255) ggCTTTCAATCAATCTTACTTAAACTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTa < 2:341610/141‑1 (MQ=255) gCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAAGCCAAAATCTGCCGTTTac > 2:719178/1‑141 (MQ=255) cTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTaca < 2:437428/141‑1 (MQ=255) tttCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTacac < 2:567694/141‑1 (MQ=255) tcaatcaaTCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGGAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGa > 2:394172/1‑141 (MQ=255) aatcaatcTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAGAATCTGCCGTTTACACGAtt < 1:467654/141‑1 (MQ=255) caatcTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACt > 1:650808/1‑141 (MQ=255) caatcTTACTTAAATTTACCAAAAGATAGCCAATCATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACt > 1:527788/1‑141 (MQ=255) aatcTTACTTAAATTTACCACAGGTTAAGCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACtt > 1:758019/1‑141 (MQ=255) atcTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTg < 2:20566/141‑1 (MQ=255) atcTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTg > 2:582347/1‑141 (MQ=255) tacttaAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGaaa < 1:128486/141‑1 (MQ=255) acttaAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAg > 2:710390/1‑141 (MQ=255) ttaAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGAt < 1:570096/141‑1 (MQ=255) taAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGaag > 2:3259/1‑139 (MQ=255) aagtgagcAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGgt < 2:569757/134‑1 (MQ=255) aaTTTACCAAAAGATAGCCAATTCTCATTAGTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATgga > 2:543269/1‑140 (MQ=255) aCCAAAAGATAGCCAATTTTCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTaa < 2:42851/141‑1 (MQ=255) ccAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTaaa > 1:765557/1‑141 (MQ=255) ccAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTaaa > 1:379289/1‑141 (MQ=255) aaaaGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTaaaaa < 1:624748/141‑1 (MQ=255) aaaGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGGAAAAGCTGCCGTTTACACGCTTACTTGGAAAGATGGTAGTaaaaaa > 2:42767/1‑141 (MQ=255) aaaGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTaaaaaa < 1:134054/141‑1 (MQ=255) gATAGCCAAGTATCATATTCAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAaagaa < 1:220922/141‑1 (MQ=255) gCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTgg > 2:641951/1‑141 (MQ=255) atatTTAGATTTAGGACATAAAGTTAAAGCTTTGGCATATGATGAAAGCGGCGTAACACCTGAGAAGATTCGAGATGCACAATCTTCAGTGTACACGATTACTTGGCAAGACGGTGGTAAAAAATAAGTGGATCTTacgaa > 1:220008/1‑141 (MQ=255) tttagatttagGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTaagaaaga > 2:403362/1‑141 (MQ=255) tagatttagGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATa > 2:613226/1‑141 (MQ=255) tttagGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTa > 2:280626/1‑141 (MQ=255) ggAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTAcaca > 1:436024/1‑141 (MQ=255) gAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAg < 1:124816/141‑1 (MQ=255) aaaTAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAAAAATTTTTAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGc > 1:149144/1‑141 (MQ=255) aaTAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAGAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCa > 2:287359/1‑141 (MQ=255) aaTAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAGAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTAACCAGCa > 2:717545/1‑141 (MQ=255) aTAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAAGCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGTAGTGGATATTAAGAAAGATAGCTACACAGCaa < 2:657085/141‑1 (MQ=255) tAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCaaa > 2:276010/1‑141 (MQ=255) aaGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGGTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATATTAAGAAAGATAGCTCAACAGCAAACt > 2:142973/1‑141 (MQ=255) gTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTg > 2:715578/1‑141 (MQ=255) gTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTg > 1:613495/1‑141 (MQ=255) gTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTg > 1:118264/1‑141 (MQ=255) gTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACGTGGAAAGAGGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTg > 2:370628/1‑141 (MQ=255) ttAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGt < 2:194299/141‑1 (MQ=255) aaaGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGttt < 1:132800/141‑1 (MQ=255) aaaGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGttt < 1:511186/141‑1 (MQ=255) aaaGCTTTGCTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGttt > 2:9843/1‑141 (MQ=255) aaGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTg > 1:473831/1‑141 (MQ=255) gCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGat > 2:300834/1‑141 (MQ=255) gCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGat < 1:132292/141‑1 (MQ=255) gCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGat < 1:589639/141‑1 (MQ=255) cTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGatt < 1:474472/141‑1 (MQ=255) tttGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGattc > 1:209561/1‑141 (MQ=255) tttGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAAATAGCTACACAGCAAACTTGTCTCattc < 2:758019/141‑1 (MQ=255) agatgaACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAATAAGTGGATCTTAAGAAAGACAGCTACACAGCAAACTTGTTTGATTCAAATTCAAt < 1:594714/140‑1 (MQ=255) ggTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAATCAAAtt > 1:243566/1‑141 (MQ=255) ggTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAAtt > 1:122973/1‑141 (MQ=255) ggTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAAtt > 1:419983/1‑141 (MQ=255) ggTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAAtt > 1:558812/1‑141 (MQ=255) ggTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAAtt > 2:443594/1‑141 (MQ=255) ggTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAAtt < 1:285615/141‑1 (MQ=255) tgtAACACCTGAGAAGATTCGAAATGCAGAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGTTAATAGTAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGa < 1:717545/141‑1 (MQ=255) tgtAACACCTGAGAAGATTCGAAATGCAGAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGa < 1:287359/141‑1 (MQ=255) tgtAACACCTGAGAAGATTCGAAATGCAAAATCTTCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGa < 2:485254/141‑1 (MQ=255) tgtAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGa < 1:710390/141‑1 (MQ=255) tgtAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGa < 2:379289/141‑1 (MQ=255) tgtAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGa < 2:765557/141‑1 (MQ=255) tAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGata > 2:433323/1‑141 (MQ=255) tAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTAGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGata > 2:564521/1‑141 (MQ=255) acacCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATAtt < 1:300834/141‑1 (MQ=255) aacCCGAGAAGATTCGAAATGCAAAATCTGCCGGTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTa < 2:195854/140‑1 (MQ=255) aTTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAATGTAAAAACt < 1:582347/141‑1 (MQ=255) ttCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAATGTAAAAACta > 2:356308/1‑141 (MQ=255) aTGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAATGTAAAAACtaaataaa > 2:604933/1‑141 (MQ=255) gCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAATGTAAAAACTAAATAAaca > 2:597048/1‑141 (MQ=255) gCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAATGTAAAAACTAAATAAaca > 2:597049/1‑141 (MQ=255) aaaaTCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAATGTAAAAACTAAATAAACACt < 2:515561/141‑1 (MQ=255) | AGATGGCATTATGGCTTTCAATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAATAAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCAAAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAGAAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAATGTAAAAACTAAATAAACACT > CP000730/984220‑984498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |