| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 398,446 | A→G | 4.4% | N156S (AAC→AGC) | USA300HOU_0366 → | OFeT family oxidase‑dependent iron (Fe2+) transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 398,446 | 0 | A | G | 4.4% | 340.7 / 2.9 | 119 | N156S (AAC→AGC) | USA300HOU_0366 | OFeT family oxidase‑dependent iron (Fe2+) transporter |
| Reads supporting (aligned to +/- strand): ref base A (66/46); new base G (4/2); total (70/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
ATTAATTGCTTATGAAGAGAAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGTCACCATTAGATACGGCAAAAGT > CP000730/398306‑398584 | agtAATTGCTTATGAAGAGAAATTGGCTAGTAAAGTTGCGGGCTCTAAGTTTAAACTATTGCAGCAGCAAGTCGATTCTAAAGATGCTGTGATGACAGAAGCGATTAAACATAAAATTAAAGCGGAATTAGAATCTTTGaa < 2:809642/139‑1 (MQ=255)aTTAATTGCTTATGAAGAGAAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGaa > 1:422688/1‑141 (MQ=255) ttAATTGCTTATGAAGAGAAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGaaa > 1:1023823/1‑140 (MQ=255) aaTTGCTTATGAAGAGAAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTGTGAACaa > 1:862649/1‑141 (MQ=255) cTTATGAAGAGAAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAAATATTGCAACAGCCAGTCGAAGCTAAAGATGCTACCAAGCCAAAAACGATTAAAGATAAAAATAAAGCGGAAGTAGAATCTTTAAACAATAgat > 2:719595/1‑139 (MQ=255) gAAGAGAAATTGGCTAGTAAAGATGCGGGTTCTAAAATGAAACTATTGCAACAGCAAGTCGATGCTAAAGAGGCTACGATGACAAAAGCGATTGAAGAGAAAAATAAAACGGAATTAGAATCTTTGAACAATAGGTTGaag > 2:593486/1‑140 (MQ=255) gAAGAGAAATTGGCTAGAAAAGCAACTGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGaaa > 2:784874/1‑140 (MQ=255) aaGAGAAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGCTAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATc > 2:565623/1‑141 (MQ=255) gagaAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAg < 2:83980/141‑1 (MQ=255) gaAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGAt > 1:731696/1‑141 (MQ=255) gaAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGAt > 2:1077434/1‑141 (MQ=255) gaAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGAt > 1:436388/1‑141 (MQ=255) gaAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGAt > 1:731706/1‑141 (MQ=255) gaAATGGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGAt < 2:156658/141‑1 (MQ=255) gaAACTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGAt > 1:751681/1‑141 (MQ=255) aaTTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAACGCGGTATTAGAATCTTTGAACAATAGTTTGAATCAGAttt < 2:1011169/141‑1 (MQ=255) gCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACa > 2:335892/1‑141 (MQ=255) gCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGATTGAATCAGATTTGGACa > 2:226012/1‑141 (MQ=255) cTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACCATAGTTTGAATCAGATTTGGACaa > 1:111117/1‑141 (MQ=255) cTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGACGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACaa > 2:1019630/1‑141 (MQ=255) aaaGATGCGGGTTCTAAAATTAAACTATTGCAAGAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAAt < 2:614925/141‑1 (MQ=255) aGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGa > 2:1088449/1‑141 (MQ=255) aTGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAAAAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGaaa < 1:788679/141‑1 (MQ=255) tGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAAc > 1:990384/1‑141 (MQ=255) gCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAGCAATAGTTTGAATCAGATTTGGACAAGTAATGAAACa > 2:805751/1‑141 (MQ=255) gCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAGCAATAGTTTGAATCAGATTTGGACAAGTAATGAAACa > 1:815377/1‑141 (MQ=255) gCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACa < 2:451583/141‑1 (MQ=255) gCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACa < 2:962169/141‑1 (MQ=255) ggggTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCATATTTGGACAAGTAATGAAACAg < 2:807929/140‑1 (MQ=255) cGGGTTCTAAAATTAAACTATTGCAACAGCAAGGCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAg > 2:286313/1‑141 (MQ=255) cGGGATCTAAAATTACACTCTTGCAACAGCAAGTAGATGCTAAAGATGCTGCGATGACAAAAGCGGTTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAg > 2:342387/1‑141 (MQ=255) gggTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAGTAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGaacaagt > 2:754832/1‑136 (MQ=255) gggTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGt > 1:1021828/1‑141 (MQ=255) cTAAGATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAAGAATAGCTTGAATCAGATTTGGACAAGTGATGAAACAGTGATTc > 1:778158/1‑141 (MQ=255) cTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTACAGATAAAAATAAAGCGGAATTAGAATCTTTGAGCAGTAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTc > 1:96089/1‑141 (MQ=255) aaaaTTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAATAATGAAACAGTGATTCGc > 1:131283/1‑141 (MQ=255) aaaaTTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATATTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGc > 1:293482/1‑141 (MQ=255) aaaTTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCa < 1:990521/141‑1 (MQ=255) caccTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTAt < 1:976125/138‑1 (MQ=255) aaaCTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTAt < 1:976131/141‑1 (MQ=255) aaCTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGGCAAACGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATg > 1:155924/1‑141 (MQ=255) aaCTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAACCAGTGATTCGCAATTATg > 2:978589/1‑141 (MQ=255) aaCTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATg > 2:919846/1‑141 (MQ=255) aaCTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATg < 2:1018095/141‑1 (MQ=255) aCTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGCAAAAGTGATTCGCAATTATGa > 2:736126/1‑141 (MQ=255) aCTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGGGATGCGAAATTATGa > 2:895683/1‑141 (MQ=255) aCTATTGAAACAGAAAGTCGATGCTAAATATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGTAATTAGAATCTTTGCACAATAGTTTGAATCAGACTTGGACTAGTAATGAAACAGTGATTCGCAATTATGa < 2:880962/141‑1 (MQ=255) ctagtgccaaacgaaGTCGACGCTAAAGATGCTGCGATGACGAAAGCGATTAAAGATAAAAATCACGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAACAAGTGATTCGCAATTATGAc < 2:616757/128‑1 (MQ=255) cTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGAc > 2:605612/1‑141 (MQ=255) gCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTCTGAATCAGATTTGGACAAGTAAGGAAACAGTGATTCGCAATTATGACGCAAATCAata > 2:941104/1‑141 (MQ=255) gCAAGTCGAAGCTAAAGATGCTGCGATGACAAAAGATTCCAAATTAACCAATGCCACGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAGTTATGGCGCAAATCAata > 1:809450/1‑141 (MQ=255) cAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGACTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAatat > 2:435432/1‑141 (MQ=255) aaGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAACCAatagg > 2:398775/1‑139 (MQ=255) aaGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGAT‑AAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGAAATTATGACGCAAATCAATATgg > 2:1056095/1‑141 (MQ=255) gTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGAGGAAGTAGAAGCTTTGAATTTTTGATTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGa > 1:529096/1‑141 (MQ=255) gATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATCTGGACaa > 1:441418/1‑141 (MQ=255) tGCTAAAGAGGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAATAATAGTTTGAATCAGATTTGGACAAGTATTGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAAt < 1:28660/141‑1 (MQ=255) agCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAAt < 1:705770/140‑1 (MQ=255) gCTAAAGATGCTGCGATGACAAAAGAGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAGGTAATGAAACAGTGATTCGCAANTATNANGCAACCCAATATGGCCACAtt > 1:555088/1‑141 (MQ=255) cgaaaGATGGTGCGACGATAAAGGCGATTAAAGATAAAAATAAAGCGGAATTAGGATCTTTGAACAATAGTTTGAATCAGATTTGGACAATTAGTGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTg < 2:607540/139‑1 (MQ=255) aaGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCCATATGGACAAAGTGAAg > 1:14048/1‑141 (MQ=255) aaGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAg > 1:571461/1‑141 (MQ=255) aaGATGCTGCGATGACAAAAGCGAGATAAGATAAAAATAAAGCCGCATTGGAATCTTTGAACAATAGTATGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAg < 1:521046/141‑1 (MQ=255) gatgatGCGCTGACAAAAGCGATTAAAGATAAAAATAACGCGGAATTAGAATCTTTGAACAATAGCTTGAATCAGATGTGGACAAGTAATGAAACAGTGATTCGCCATTCTGACGCAAATCAATAAGGACCCATTGAAGTc > 2:385584/1‑141 (MQ=255) gATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTc > 2:2232/1‑141 (MQ=255) ctgcGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCat < 2:658088/141‑1 (MQ=255) ctgcGATAAAAAAAGCGATTAAATATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGGGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCat < 2:261712/141‑1 (MQ=255) tgcGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATATTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCatt > 1:347563/1‑141 (MQ=255) cAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAAc < 1:956059/141‑1 (MQ=255) cAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAAc < 1:689448/141‑1 (MQ=255) aaaaaGCGATGAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAAc < 2:462440/140‑1 (MQ=255) aaaaaGCGAGTAAAGATAAAAATAAAGCGGAATTAGAATTTTTGAACAATAGTTTGAATCAGATTTGCACAAGTAATGAAACAGTGATTCGCAATTATGACCCAAATCAATATGGACAAATTGAAGTCGCATTATTACAAc < 2:149865/140‑1 (MQ=255) aaaaGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACt < 2:422688/141‑1 (MQ=255) aaaGCGATTAAAGGTAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACtt < 2:525581/141‑1 (MQ=255) aaaGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACtt < 2:180525/141‑1 (MQ=255) aaaGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACtt > 1:1028476/1‑141 (MQ=255) aGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAg < 2:899233/141‑1 (MQ=255) gCGATTAAAAAAAAAAATAAAGCGGAATTAGAATCCTTGAGCAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGa < 2:815377/141‑1 (MQ=255) gATTAAAGATAATAATAAAGCGGAATTATAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAAt < 2:862649/141‑1 (MQ=255) gATTAAAGATAAAAATAAAGCGGAATGAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAAt < 2:545826/141‑1 (MQ=255) tAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGc < 1:605612/141‑1 (MQ=255) aaGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCaa > 1:800129/1‑141 (MQ=255) aaGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCaa > 2:884944/1‑141 (MQ=255) aaGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCaa > 1:939584/1‑141 (MQ=255) aaGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATCGCaa > 2:822467/1‑141 (MQ=255) aTAAAAATAAAGCGGAATTAGAATCTTCGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAACATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAAtcc < 1:171799/141‑3 (MQ=255) aaaaTAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATa < 2:684262/141‑1 (MQ=255) aaaaTAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATa < 1:726643/141‑1 (MQ=255) aTAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGt < 1:894640/141‑1 (MQ=255) aaaGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGTcc > 1:1062084/1‑140 (MQ=255) aGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGAATTATTATAACTTAGAATTGCAATTCATAAGTCAcc > 1:465825/1‑141 (MQ=255) cGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTAGCATTATTACAACTTAGAATTACAATTCATAATTCACCAt > 2:583538/1‑141 (MQ=255) gAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTGGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGTCACCATTa > 2:476921/1‑141 (MQ=255) gAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAAAATTGCAATTCATAAGTCAcacata > 2:501111/1‑136 (MQ=255) aTTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGTCACCATTAGa > 2:165293/1‑141 (MQ=255) aGAATCTTTGAACAATAGTTTGAATCAGAATTGGACAAGTAATGAACCAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGTCACCATTAGATAc < 1:845984/141‑1 (MQ=255) ttCTTTGATCAATATTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGCCAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGTCACCATTAGATACGGc < 1:248774/140‑1 (MQ=255) cTTTGAACAATAGTGTGAAGCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGTCACCATTAGATACGGCaa > 1:608747/1‑141 (MQ=255) tGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGTCACCATTAGATACGGCAAAAg > 2:688491/1‑141 (MQ=255) gAACAATAGTTTGTATCAGATTTGGACAAGTAATGACATTATGATTCGCAATTATGACGCAAATCAATAAAGCCAAAGTGGTGTCGCATTATTACAACTTAGAAGTGCAATTCATAGGTCACCATGAGATACGGCAAAAgt < 2:162289/141‑1 (MQ=255) | ATTAATTGCTTATGAAGAGAAATTGGCTAGTAAAGATGCGGGTTCTAAAATTAAACTATTGCAACAGCAAGTCGATGCTAAAGATGCTGCGATGACAAAAGCGATTAAAGATAAAAATAAAGCGGAATTAGAATCTTTGAACAATAGTTTGAATCAGATTTGGACAAGTAATGAAACAGTGATTCGCAATTATGACGCAAATCAATATGGACAAATTGAAGTCGCATTATTACAACTTAGAATTGCAATTCATAAGTCACCATTAGATACGGCAAAAGT > CP000730/398306‑398584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |