| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2085296 = | 62 (0.680) | 63 (0.770) | 48/232 | NT | 48.0% | intergenic (‑558/‑400) | mapW2/USA300HOU_1944 | cell surface protein MapW2/hypothetical protein |
| ? | CP000730 | = 2128343 | 81 (0.990) | intergenic (+57/+1062) | int/USA300HOU_2011 | bacteriophage integrase/possible leukocidin subunit | |||||
Only 100 of 174 total aligned reads displayed.
AAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACTTTAA > CP000730/2085156‑2085436 | ctacatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactcaaaacccaataaatactgttgttacaaggtttctat < 2:296367‑M1/1‑1 (MQ=255)aaaaaaaGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTT > 2:344612‑M1/1‑141 (MQ=255) acatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGt < 1:312478‑M1/3‑1 (MQ=255) acatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGt > 1:620322‑M1/139‑141 (MQ=255) acatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGt < 2:102031‑M1/3‑1 (MQ=255) acatccatgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaagaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGt < 2:694606‑M1/3‑1 (MQ=255) tccgtgtattctcatttgttagaagaaaaatttaatgaagaggacgaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATc < 2:487210‑M1/6‑1 (MQ=255) ccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggatcccggatttactccaaacccactaaatactgttgttacaaggtttctaTGTATcc < 1:1037356‑M1/7‑1 (MQ=255) ccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATcc < 1:843864‑M1/7‑1 (MQ=255) ccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATcc < 1:778203‑M1/7‑1 (MQ=255) gtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCaa > 1:396448‑M1/133‑141 (MQ=255) gtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCaa < 2:669080‑M1/9‑1 (MQ=255) gtgtaatctcatttgttagaagaaaaatttaatgaagaagacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCaa > 2:574425‑M1/133‑141 (MQ=255) ctgtattctcatttgttagaagaaaaatttaatcaagaggacaaaaaaacaactacaattttagaaagtatgtaatttagggacccattagggacttcaaacccaataaatactgttgttgcaaggtttctaTGTATCCaa > 2:605107‑M1/133‑141 (MQ=255) tgttttctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccactagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCaaa < 2:958911‑M1/10‑1 (MQ=255) tgtattctcatttgttagaagaaaaatttaatgaagaggaccaaaaaacacctaaaattttagaaagtctgtaattgagggacccattagggaatccaaacccaataaatactgttggtacaaggtttctcTGTATCaaaa < 2:54254‑M1/10‑1 (MQ=255) tattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACt < 2:632058‑M1/12‑1 (MQ=255) attctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactcccaacccagtaaatactgttgttacaaggtttctaTGTATCCAAACTg < 1:748693‑M1/13‑1 (MQ=255) ttctcatttgttagaagaaaaatttaatgaagaggacaaacaagaatgtagaattttagaaagtatgtaatttagggacccattagcgactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTgg < 1:484805‑M1/14‑1 (MQ=255) tctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGga < 1:883188‑M1/15‑1 (MQ=255) tctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGga < 2:14326‑M1/15‑1 (MQ=255) catttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACAggagaa < 2:937508‑M1/18‑2 (MQ=255) tAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGgggcaatata > 1:951356‑M1/1‑131 (MQ=255) tagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAAc > 2:357357‑M1/117‑141 (MQ=255) atcAAATTTATTAGTAGTTTGTGCACTAACCGACAAGAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAAc < 2:841444/139‑1 (MQ=255) agaagaaaaatttaatgaagaggacaaaaaaacacctaaaattttagaaagtatgtaatttagggaaccataaggcgctacaaacccaataaaaactgttgttataagatttctaTGTATCCAAACTGGAGACATTTAACa < 2:877798‑M1/26‑1 (MQ=255) agaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACa > 1:453544‑M1/116‑141 (MQ=255) agaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTATATCCAAACTGGAGACTTTTAACa < 2:610392‑M1/26‑1 (MQ=255) agaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATaa < 1:69459‑M1/29‑1 (MQ=255) aaTTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATaa > 1:850424/1‑141 (MQ=255) aaTTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATaa < 2:563180/141‑1 (MQ=255) aaTTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATaa < 1:168895/141‑1 (MQ=255) aTTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATaaa < 1:1076150/141‑1 (MQ=255) aaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATaaaa < 2:273673‑M1/31‑1 (MQ=255) aatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGCCTTTTAACATAAAATTa < 1:1039346‑M1/34‑1 (MQ=255) atttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTAc > 2:1090555‑M1/107‑141 (MQ=255) tttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACt < 2:902758‑M1/36‑1 (MQ=255) ttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACtt < 1:282831‑M1/37‑1 (MQ=255) aatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAt < 2:307641‑M1/39‑1 (MQ=255) acgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATc > 1:124736‑M1/102‑141 (MQ=255) aGTTGGTGCACGTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATCTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATc < 1:742362/141‑1 (MQ=255) gaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCa < 1:13831‑M1/45‑1 (MQ=255) ggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccatgagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCaaa < 2:929358‑M1/47‑1 (MQ=255) gCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCaaa < 1:545849/141‑1 (MQ=255) gCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCaaa < 1:217127/141‑1 (MQ=255) aaaaaaaacaactaaaattttagaaagtttgtaatttagggacccattagggactccaaacccaataagtactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAg > 2:416349‑M1/92‑141 (MQ=255) ttACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGt < 1:433702/141‑1 (MQ=255) ttACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTGTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGt > 1:793920/1‑141 (MQ=255) aaaaaacaactaaaattttagaaagtatgtaatttagggccccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTa > 1:26791‑M1/90‑141 (MQ=255) aCTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTaa > 2:302110/1‑141 (MQ=255) aaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggggtctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTaaaa < 1:978615‑M1/55‑1 (MQ=255) acaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACa < 1:693422‑M1/57‑1 (MQ=255) caactaaaattttagaaagtatgtcatatagggacccattagggactccaaaccaaataaatactgtagttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTCCTTATCATTCAAAAAGTAAAACAg < 2:510007‑M1/58‑1 (MQ=255) caactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCACACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAg < 2:399910‑M1/58‑1 (MQ=255) tAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCat < 1:411499/141‑1 (MQ=255) tGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCataat > 2:70861/1‑141 (MQ=255) aattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGcataatt < 1:905042‑M1/65‑2 (MQ=255) aatcttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCataata > 2:323861‑M1/77‑141 (MQ=255) aaGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTACAACAGCATAATATCaa > 2:834249/1‑141 (MQ=255) cGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGtt < 1:896178/141‑1 (MQ=255) gtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTtat > 2:244068‑M1/66‑141 (MQ=255) tCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTGtata > 1:514101/1‑141 (MQ=255) aagaTGATACTTATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttat < 2:894538/141‑1 (MQ=255) tgatACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGgggcaatataaacgcgctgatttaatcggacaatcttcttatattaaaaataatgatgtcgtaatattcaatga < 2:614970‑M1/141‑75 (MQ=255) gacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttatcattat < 2:262524‑M1/90‑1 (MQ=255) aCTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACGGGAGAATTACATCATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATAAAGGTTTATAACTttatcattatca > 1:808325/1‑141 (MQ=255) ccattagggactccaaacccaataaatactgttgttacaacgtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaa > 1:204053‑M1/49‑141 (MQ=255) tGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaat < 1:261947/141‑1 (MQ=255) taTTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaata < 1:242677/140‑1 (MQ=255) gATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaata < 1:795495/141‑1 (MQ=255) tagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaataat < 1:457475‑M1/97‑1 (MQ=255) tagggactccaaacccaataaatactgttgttacaaggaccctaTGTATCCAAACTGGAGACATTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAAGCTTATAACTTTATCATTATcaataaa < 2:1027718‑M1/97‑2 (MQ=255) ggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAATAGCATAATATCAAAGTTTATAACTTTATcattaccaaacattac < 2:264098‑M1/100‑8 (MQ=255) tccaaatccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAGATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCat > 2:823692‑M1/38‑141 (MQ=255) tccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCat < 2:609681‑M1/104‑1 (MQ=255) tagttagtCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCata < 1:790061/141‑1 (MQ=255) tagttagtCATAACGTTTATATGTTATCGACCGTTTTAGATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTAGCATTATCAGTAATACCTCata < 1:571953/141‑1 (MQ=255) aaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCCtata > 2:765724‑M1/35‑141 (MQ=255) aaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCAtata < 1:338022‑M1/107‑1 (MQ=255) aaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCAtata < 1:945385‑M1/107‑1 (MQ=255) aaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATACAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCAtata > 2:288474‑M1/35‑141 (MQ=255) aacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATACCTTTATCATTATCAATAATCACTCATataa < 2:876979‑M1/108‑1 (MQ=255) aacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataa < 1:622989‑M1/108‑1 (MQ=255) gtCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataaaat > 2:992717/1‑141 (MQ=255) atactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttt > 2:250215‑M1/24‑141 (MQ=255) gTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAtttt > 1:892092/1‑141 (MQ=255) ctgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttag < 1:983574‑M1/121‑1 (MQ=255) tataTGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagg < 1:331899/141‑1 (MQ=255) tatGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATaaaataacatacatggga > 1:1080941/1‑133 (MQ=255) tGTTATCGACCGTTTTGTAACCAAACTGGACACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggact < 2:1070104/141‑1 (MQ=255) gtacaaggtttctaTGTATCCAAACGGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactt > 1:56503‑M1/15‑141 (MQ=255) gTTATCGACGCTTTTGTATCCCAACTGGAGTCTTTTAACATAAAATTACTTATCATTCAAAAAGAAAAACAGCATAACATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAACTAAAAttttagggactt < 1:995994/141‑1 (MQ=255) gTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAGCAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactt < 1:860162/141‑1 (MQ=255) ccGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCACTAATAGCTCAAATAAAATAAACttttggcgatattttaggga > 1:227959/1‑141 (MQ=255) cGTTTTGTATCCAAAGTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggac > 1:821263/1‑141 (MQ=255) cGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggac > 2:864456/1‑141 (MQ=255) cGTTTTGTATCCAAACTGGAAACTTTTAACATAAAATTACTTATCATACAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATAATCAAAACAACCTCATATAAAATAAAAtcttaggaacgttttaaggaa > 2:163015/1‑140 (MQ=255) cGTTTTGTACACAAACTGGAGACTATTAACATCAATTGACAAATCATTCAAATTAAAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggac > 1:809817/1‑141 (MQ=255) ttttGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATtttagggactttttagggactt > 2:828373/1‑141 (MQ=255) TGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACtttaa > 1:344612‑M1/1‑141 (MQ=255) | AAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACTTTAA > CP000730/2085156‑2085436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |