Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 492,511 C→T 6.4% A313V (GCA→GTA)  USA300HOU_0465 → possible LysM family autolysin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730492,5110CT 6.4% 187.3 / 2.1 64A313V (GCA→GTA) USA300HOU_0465possible LysM family autolysin
Reads supporting (aligned to +/- strand):  ref base C (20/39);  new base T (2/2);  total (22/42)
Fisher's exact test for biased strand distribution p-value = 6.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01

ATGGTTACACTATCGACAATAGACCTACTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAGTTGGATTGAATCCTAA  >  CP000730/492373‑492650
                                                                                                                                           |                                                                                                                                           
aTGGTTACACTATCGACAAGAGACCCACTGGAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCAc                                                                                                                                           <  1:52722/141‑1 (MQ=255)
  ggTTACACTATCGACAATAGACCTACTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCa                                                                                                                                         <  2:36168/141‑1 (MQ=255)
    ttACACTATCGACAATAGACCTACTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAgg                                                                                                                                       >  1:132446/1‑141 (MQ=255)
     tACATTATCGACAATAGACCTATTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGt                                                                                                                                      <  2:338924/141‑1 (MQ=255)
     tACACTATCGACAATAGACCTACTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGCAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGt                                                                                                                                      >  2:272674/1‑141 (MQ=255)
            tCGACAATAGACCTACTGTAGGTTCTATCGCTCAAACAGGTGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTaa                                                                                                                               <  2:179349/141‑1 (MQ=255)
                    aGACCTACTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGa                                                                                                                       <  2:145107/141‑1 (MQ=255)
                    aGACCTACTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGa                                                                                                                       <  2:588553/141‑1 (MQ=255)
                       ccTACTGTAGGTTCTAACGCTCAAACAGATGTAGGTTACTATGGTCATGATATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGGATTTTAACTTACAGAACg                                                                                                                    >  1:386114/1‑141 (MQ=255)
                        cTACTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACgg                                                                                                                   <  2:111857/141‑1 (MQ=255)
                          aCTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGTACCAGGTATTTTAACTTACAGAACGGTa                                                                                                                 >  1:752443/1‑141 (MQ=255)
                          aCTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGGAGAACGTCTACTCGAGGATTGGAGTATTTTAGTTTAAGAAAGGAACTATTC‑AGCTGTACCAGGTATTTTAACTTACAGAACGGTa                                                                                                                 >  1:182175/1‑141 (MQ=255)
                           cTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTAc                                                                                                                <  1:327925/141‑1 (MQ=255)
                               aGGTTCTATCGTTCAAACTGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAAGGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGc                                                                                                            <  2:464182/141‑1 (MQ=255)
                               aGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGc                                                                                                            <  2:653823/141‑1 (MQ=255)
                               aGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGc                                                                                                            <  2:735233/141‑1 (MQ=255)
                                  ttCTATCGTTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAACGGAACTATTCAAGATG‑ACCATGTATTTTAACTTACAGAACGGTACCAGCTTa                                                                                                         <  1:767677/141‑1 (MQ=255)
                                       tagttaagtcggATCTAGGTTAATAGGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAg                                                                                                    <  1:559259/130‑1 (MQ=255)
                                          ttCAAAGAGATGTAGGTTACTATGGTCATGTTATGTTTGTACAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTaa                                                                                                 <  2:301680/140‑1 (MQ=255)
                                          cTCAAACAGATGTAGGTTACTATGGTCATGTTAGGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTCCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTCCGTTACAGAACGGTACCAGCTCACGCAGTaa                                                                                                 <  1:570138/141‑1 (MQ=255)
                                           tCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTaaa                                                                                                >  1:320645/1‑141 (MQ=255)
                                            aaaaCAGATGTTGGTCACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAaat                                                                                               <  1:188483/140‑1 (MQ=255)
                                             aaaCAGATGTAGGTTACTATGGACATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAaata                                                                                              <  2:47769/141‑1 (MQ=255)
                                              aaCAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAaataa                                                                                             <  2:346105/141‑1 (MQ=255)
                                               aCAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAaataat                                                                                            <  2:621090/141‑1 (MQ=255)
                                                  gATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATtaa                                                                                         >  1:338648/1‑140 (MQ=255)
                                                   ttGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATtata                                                                                        <  1:384500/140‑1 (MQ=255)
                                                    tGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAg                                                                                       >  2:220303/1‑141 (MQ=255)
                                                     ttgggTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCATCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGa                                                                                      <  2:645666/138‑1 (MQ=255)
                                                            aCTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGAGGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAGGTAAATAATCATAGATATATTc                                                                               >  2:175826/1‑141 (MQ=255)
                                                                  gTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTaaa                                                                         <  2:591537/141‑1 (MQ=255)
                                                                   tCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAg                                                                        <  1:498464/141‑1 (MQ=255)
                                                                         tatgttTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTAc                                                                  <  1:478849/141‑1 (MQ=255)
                                                                           tgttTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGtgtgctgg                                                                >  2:157829/1‑134 (MQ=255)
                                                                            gttTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGta                                                               >  1:101193/1‑141 (MQ=255)
                                                                                gTAGAACGTCTCAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGtatata                                                           <  1:684074/141‑1 (MQ=255)
                                                                                  aGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATaaa                                                         <  1:322911/141‑1 (MQ=255)
                                                                                  aGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCGTACGTATATaaa                                                         >  1:88560/1‑141 (MQ=255)
                                                                                       gtgtAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAatatat                                                    <  1:262748/141‑1 (MQ=255)
                                                                                        tgtAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAAtatata                                                   <  2:700436/141‑1 (MQ=255)
                                                                                          tAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAAt                                                 <  1:320830/141‑1 (MQ=255)
                                                                                            aaTAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGa                                               <  1:678319/141‑1 (MQ=255)
                                                                                                 cGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATTATGAATTcc                                          >  2:5267/1‑141 (MQ=255)
                                                                                                  gATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCt                                         <  2:719911/141‑1 (MQ=255)
                                                                                                  gATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCt                                         <  1:359392/141‑1 (MQ=255)
                                                                                                  gATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCt                                         <  2:417814/141‑1 (MQ=255)
                                                                                                   atgcaagtaATTTAGTGTCAAAATTGTAGCATTC‑AACTTCTCTACGTATTTTTACTCACAAAACGGTACCAGCTTACCAAGTAAATAATTACAGTTATATTCACTAAAGTCCTTCGTAGATAAATATATAATGagtagcta                                        <  2:41687/136‑8 (MQ=255)
                                                                                                   aTGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACTTATATAAATCTATAATGAATTCCTa                                        <  1:387498/141‑1 (MQ=255)
                                                                                                     ggTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTAtt                                      >  2:360762/1‑141 (MQ=255)
                                                                                                        agtaTTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACa                                   >  1:234377/1‑141 (MQ=255)
                                                                                                                aGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACaa                           >  2:480587/1‑141 (MQ=255)
                                                                                                                aGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACaa                           >  1:114857/1‑141 (MQ=255)
                                                                                                                      aGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGaa                     <  1:612899/141‑1 (MQ=255)
                                                                                                                      aGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTAAAAAAAATCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGaa                     >  2:383334/1‑141 (MQ=255)
                                                                                                                       gAAATGAACTATTC‑AGCTGCACCATGTATTTTAACTTATAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGaaa                    >  1:497887/1‑141 (MQ=255)
                                                                                                                       gAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGaaa                    >  2:534831/1‑141 (MQ=255)
                                                                                                                         aaTGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAg                  >  2:485865/1‑141 (MQ=255)
                                                                                                                          aTGAACTATTC‑AGCTGTACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAGt                 <  2:752443/141‑1 (MQ=255)
                                                                                                                          aTGAACGATTC‑AGCTGTACCAGGTATTTTAACTTACAGAACGATACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAGt                 <  2:182175/141‑1 (MQ=255)
                                                                                                                           tGAACTATTC‑TCCGGCACCAGGTATTTTAACTTACTCATCTGTACCAGCTTACCAATTAAATAATTATAGTTATTTTATCGAAAGTCTGACGTATCTAAATATTTAATTTATCCCTATTCCATTTCACAAGCTGAAAAGtt                <  2:74450/141‑1 (MQ=255)
                                                                                                                           tGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAttt                >  2:635443/1‑141 (MQ=255)
                                                                                                                                        cTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAGTTGGATTGAATCCt    <  1:168133/141‑1 (MQ=255)
                                                                                                                                        cTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAGTTGGATTGAATCCt    <  1:220303/141‑1 (MQ=255)
                                                                                                                                         tGCACCAGGTATTCTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTACAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAGTTGGATTGAATCCTa   <  1:434516/141‑1 (MQ=255)
                                                                                                                                          tcACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTGCACAAGCTGAAAAGTTGGATTGAATCCTaa  <  1:633031/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
ATGGTTACACTATCGACAATAGACCTACTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGTTTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTC‑AGCTGCACCAGGTATTTTAACTTACAGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAAAGTCTTACGTATATAAATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAGTTGGATTGAATCCTAA  >  CP000730/492373‑492650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑