| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1755658 = | 37 (0.650) | 3 (0.060) | 3/242 | NT | 7.9% | intergenic (‑55/+300) | USA300HOU_1643/rpmA | GTP‑binding protein/ribosomal protein L27 |
| ? | CP000730 | 1755694 = | 36 (0.680) | intergenic (‑91/+264) | USA300HOU_1643/rpmA | GTP‑binding protein/ribosomal protein L27 | |||||
ATAAGGGGGACAAAGGAATACAGTTGCAGCGTTTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTAAT‑TATT‑TACAATATATAAGGGGCTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1755804‑1755658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggggctctTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCTTTGTCCCCCTTATAGTTTAGTGATTAGGGGCTCTTATAC > CP000730/1755694‑1755830 ATAAGGGGGACAAAGGAATACAGTTGCAGCGTTTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTAAT‑TATT‑TACAATATATAAGG > 2:174521/1‑141ATAAGGGGGACAAAGGAATACAGTTGCAGCGTTTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTAAT‑TATT‑TACAATATATAAGG < 2:255477/141‑1 AGGGGGACAAAGGAATCCATTTGCAGCGTTTAAAGAATAAACTGTACCGCAATTGGTGCAGAGTTATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGTCCCTGAT‑TATT‑TACAATATATAAGGGGC < 2:267972/141‑1 AGGGGGACAAAGGAATACAGTTGCAGCGTTTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTAAT‑TATT‑TACAATATATAAGGGGC > 1:412647/1‑141 AGGGGGACAAAGGAATACAGTTGCAGCGTGTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTAAT‑TATT‑TACAATATATAGGGGGC > 1:361133/1‑141 GGGGGACAAAGGCATACAGTTGCAGCGTTTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTAAT‑TATT‑TACAATATATAAGGGGCT < 1:180953/141‑1 GGGGGACAAAGGAACACAGTTGCAGCGTTTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTAAT‑TATT‑TACAATATATAAGGGGCT < 1:180950/141‑1 GGGGACAAAGGAATACAGTTGCAGCGTTTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTAAT‑TATT‑TACAATATATAAGGGGCTC > 1:411332/1‑141 ATACGGGTGCAGCGTTTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTTATATATTGTA‑AATA‑ATTAGGGGCTCTTATGCAGTTAC < 2:28747/141‑1 ACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTTATATATT‑GTAAATA‑ATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATAC > 2:198253/1‑141 GTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTTATATATT‑TTAAATA‑ATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGT < 1:198253/141‑1 GGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTATCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCTTTGTCCCCCTTATAGTTTAGTGATTAGGGGCTCTT > 1:447492/1‑141 GGCTCTCATGCAGTTACTTTTATAAATCTTTGCTTTCAAATACCTATACTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAATGCTGCAACTGTATTCCTTTGTCCCCCTTATAGTTTAGTGATTAGGGGCTCTTAT < 1:555433/141‑1 CTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCTTTGTCCCCCTTATAGTTTAGTGATTAGGGGCTCTTATAC > 1:3082/1‑141 ATAAGGGGGACAAAGGAATACAGTTGCAGCGTTTAAAGAATAAACTGTACCACAATTGGTGCTGAGAAATATAAGTATTTTAAAGCAAAGATTTATAAAAGTAACTGCATAAGAGCCCCTAAT‑TATT‑TACAATATATAAGGGGCTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1755804‑1755658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggggctctTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCTTTGTCCCCCTTATAGTTTAGTGATTAGGGGCTCTTATAC > CP000730/1755694‑1755830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |