New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2760340	40 (1.080)	3 (0.090)	3/236	NT	6.9%	coding (659/1371 nt)	citM	CitMHS family citrate‑magnesium (Mg2+):proton (H+) citrate‑calcium (Ca2+):proton (H+) symporter
	?	CP000730	= 2760395	44 (1.300)					coding (604/1371 nt)	citM	CitMHS family citrate‑magnesium (Mg2+):proton (H+) citrate‑calcium (Ca2+):proton (H+) symporter

AACAGCTAAAGTTAAAGCTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATCCATACCATAATTCATTGACACTTTTGGCTTT  >  CP000730/2760201‑2760479                                                                                                                                            |                                                                                                                                            aaCAGCTAAAGTTAAAGCTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTaa                                                                                                                                            <  1:210216/141‑1 (MQ=255)  aCAGCTAAAGTTAAAGCTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAAt                                                                                                                                           <  1:334951/141‑1 (MQ=255)       tAAAGTTAAAGCTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCAtt                                                                                                                                      >  2:50230/1‑141 (MQ=255)                ttcTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTAt                                                                                                                             <  1:191725/139‑1 (MQ=255)                       ttCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCtttt                                                                                                                      >  1:183028/1‑141 (MQ=255)                          aCCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTg                                                                                                                   <  2:276482/141‑1 (MQ=255)                           cccATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGa                                                                                                                  >  2:377103/1‑141 (MQ=255)                              aTTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATAc                                                                                                               <  2:423511/141‑1 (MQ=255)                               ttttATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACg                                                                                                              <  1:58096/141‑1 (MQ=255)                               ttttATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACg                                                                                                              <  1:329644/141‑1 (MQ=255)                                      cATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTTCGGTAATTCATTTCTCTCTATTGCTTTTTTGATAGGTTTCTGt                                                                                                       >  2:421420/1‑141 (MQ=255)                                        tGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTc                                                                                                     >  1:203642/1‑141 (MQ=255)                                            tttGGTCTTTCACGTCCTTTTACAGGAAACCTTACATCTTGATCGCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTa                                                                                                 >  2:175857/1‑141 (MQ=255)                                             ttGTTCTAGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTaa                                                                                                >  1:402599/1‑141 (MQ=255)                                                ttCTTGCCCGTCCTTTTACCGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATc                                                                                             <  2:93031/141‑1 (MQ=255)                                                   ttGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCaa                                                                                          <  1:31936/141‑1 (MQ=255)                                                   ttGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCaa                                                                                          <  1:32160/141‑1 (MQ=255)                                                         gTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAtatcttggatttaaagaacagaaacgtatcaaaaaagcgatagagagaaatgaatta                                                                                    <  1:320905‑M1/141‑58 (MQ=255)                                                             ttttACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAtatcttggatttaaagaacagaaacgtatcaaaaaagcaatagagagaaatgaattaccgc                                                                                <  2:436010‑M1/141‑62 (MQ=255)                                                               ttACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATAtaccgcaa                                                                              >  1:207935‑M2/1‑133 (MQ=255)                                                               ttACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTATGTTTGTTGCGTCCAAGATAtaccgcaa                                                                              >  2:111461‑M2/1‑133 (MQ=255)                                                                    ggAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAaacaac                                                                         >  1:54911/1‑141 (MQ=255)                                                                    ggAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAaacaac                                                                         <  1:404586/141‑1 (MQ=255)                                                                      aaaCCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTTATTCGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACAt                                                                       >  2:169629/1‑141 (MQ=255)                                                                            tACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGCTACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAg                                                                 >  2:347881/1‑141 (MQ=255)                                                                            tACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAg                                                                 >  1:142597/1‑141 (MQ=255)                                                                                  ttGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAtatcttggatttaaagaacagaaacgtatcaaaaaagcaatagagagaaatgaattaccgcaaacacaagatatagatgtac                                                           <  1:3169‑M1/141‑83 (MQ=255)                                                                                    gATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAAc                                                         >  1:221720/1‑141 (MQ=255)                                                                                    gATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAAc                                                         <  2:449101/141‑1 (MQ=255)                                                                                    gATCTCGTGCATATACTTCAACGAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAAc                                                         <  1:443695/141‑1 (MQ=255)                                                                                       ctcGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCta                                                      <  1:389802/141‑1 (MQ=255)                                                                                       ctcGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCta                                                      <  1:424944/141‑1 (MQ=255)                                                                                       ctcGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCta                                                      <  1:282958/141‑1 (MQ=255)                                                                                        tcGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCtat                                                     <  2:284379/141‑1 (MQ=255)                                                                                         cGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCtatt                                                    >  2:417263/1‑141 (MQ=255)                                                                                           ttCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCtattat                                                  >  1:90890/1‑141 (MQ=255)                                                                                                    ttCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAgg                                         >  1:252560/1‑141 (MQ=255)                                                                                                         cTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTa                                    <  2:431690/141‑1 (MQ=255)                                                                                                             tttATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATTCTTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATATGTATTAATcc                                >  2:126277/1‑141 (MQ=255)                                                                                                             tttATGTACATCTATATCTTGTGTTTGCGGGAATTCCTTTCTCTCTATTGCTTTTTTTTTACTTTTCTGTTCTTTAAATCCAAGATATACCGCAGACAACATACCAAGTATGAAACCTATTGTTTGAATAGGTATTAATcc                                >  2:14783/1‑141 (MQ=255)                                                                                                              ttATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTGTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATcca                               >  1:372947/1‑141 (MQ=255)                                                                                                                aTGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATccata                             >  1:15413/1‑141 (MQ=255)                                                                                                                 tGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATccatac                            <  1:361998/141‑1 (MQ=255)                                                                                                                  gTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATAtaccgcaaacacaagatatagatgtacataaattagttgaagtatatgaacgagatcaa                           <  1:3169‑M2/141‑60 (MQ=255)                                                                                                                  gTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATccatacc                           >  2:140660/1‑141 (MQ=255)                                                                                                                                   gtTTGCGGTAATTCATTTCTCTCTATTGCTTTTGTTTTTTTTTTTTTTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATTCATATCATAATTCATTGACACtt          >  2:359507/1‑141 (MQ=255)                                                                                                                                    tttGCGTTTATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTATTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATCCATACCATAATTCATTGACACttt         <  2:364820/141‑1 (MQ=255)                                                                                                                                     ttGCGGTAtatcttggatttaaagaacagaaacgtatcaaaaaagcaatagagagaaatgaattaccgcaaacacaagatatagatgtacataaattagttgaagtatatgaacgagatcaagatgtaaggtttcctgtaa        >  1:207935‑M1/1‑8 (MQ=255)                                                                                                                                     ttGCGGTAtatcttggacgcaacaaacataaacgtatcaaaaaagcaatagagagaaatgaattaccgcaaacacaagatatagatgtacataaattagttgaagtatatgaacgagatcaagatgtaaggtttcctgtaa        >  2:111461‑M1/1‑8 (MQ=255)                                                                                                                                       gCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATAtaccgcaaacacaagatatagatgtacataaattagttgaagtatatgaacgagatcaagatgtaaggtttcctgtaaaa      <  2:436010‑M2/141‑81 (MQ=255)                                                                                                                                       gCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATCCATACCATAATTCATTGACACTTTTgg      <  1:127833/141‑1 (MQ=255)                                                                                                                                           tAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATCCATACCATAATTCATTGACACTTTTGGCttt  <  2:2350/141‑1 (MQ=255)                                                                                                                                           tAATTCATTTCTCTCTATCGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATAtaccgcaaacacaagatatagatgtacataaattagttgaagtatatgaacgagatcaagatgtaaggtttcctgtaaaaggac  <  1:320905‑M2/141‑85 (MQ=255)                                                                                                                                            |                                                                                                                                            AACAGCTAAAGTTAAAGCTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTAATTCATTTCTCTCTATTGCTTTTTTGATACGTTTCTGTTCTTTAAATCCAAGATATACCGCAAACAACATAACAAGAATGAAACCTATTATTTGAATAGGTATTAATCCATACCATAATTCATTGACACTTTTGGCTTT  >  CP000730/2760201‑2760479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.