New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1647574 =	95 (1.200)	5 (0.070)	5/258	11.4	5.3%	intergenic (+4/+60)	USA300HOU_1533/lipM	hypothetical membrane protein/lipoate‑‑protein ligase A
	?	CP000730	1647624 =	87 (1.150)					intergenic (+54/+10)	USA300HOU_1533/lipM	hypothetical membrane protein/lipoate‑‑protein ligase A
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATTTATTATTTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCTTTCTCGAAAG  >  CP000730/1647484‑1647764                                                                                                                                             |                                                                                                                                             aTTTATTATTTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTa                                                                                                                                              <  1:772749/141‑1 (MQ=255)       tattTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTaa                                                                                                                                        >  2:750062/1‑141 (MQ=255)        attTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTaaa                                                                                                                                       >  1:172924/1‑141 (MQ=255)          ttcttcATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGCAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTaaaaa                                                                                                                                     >  2:286640/1‑141 (MQ=255)           tcttcATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAac                                                                                                                                    >  2:210673/1‑141 (MQ=255)           tcttcATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAac                                                                                                                                    >  1:364014/1‑141 (MQ=255)               cATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAactact                                                                                                                                >  1:238807/1‑141 (MQ=255)                  cTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTc                                                                                                                             >  2:372667/1‑141 (MQ=255)                         gAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACAt                                                                                                                      >  1:382671/1‑141 (MQ=255)                         gAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACAt                                                                                                                      <  2:535732/141‑1 (MQ=255)                         gAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACAt                                                                                                                      <  1:286854/141‑1 (MQ=255)                         gAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACAt                                                                                                                      >  2:229178/1‑141 (MQ=255)                          aaGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATc                                                                                                                     >  2:614770/1‑141 (MQ=255)                           aGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATcc                                                                                                                    >  2:801554/1‑141 (MQ=255)                           aGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATcc                                                                                                                    <  1:648889/141‑1 (MQ=255)                            gACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTATATACTACTTTCTAAACATCCa                                                                                                                   >  2:558919/1‑141 (MQ=255)                            gACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCa                                                                                                                   >  1:182905/1‑141 (MQ=255)                            gACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTATACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCa                                                                                                                   >  2:898508/1‑141 (MQ=255)                                aaCGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCa                                                                                                               >  1:576888/1‑141 (MQ=255)                                 gcGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCAt                                                                                                              >  1:872470/2‑141 (MQ=255)                                      agtgtCGCAAAGCAATGCGTAAGTATAGAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCA‑TTGTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAAc                                                                                                        <  2:104997/137‑1 (MQ=255)                                       atatCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAAc                                                                                                        <  2:378440/141‑1 (MQ=255)                                       atatCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAAc                                                                                                        <  2:378372/141‑1 (MQ=255)                                        tatCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACg                                                                                                       >  2:499664/1‑141 (MQ=255)                                         atCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAATATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGa                                                                                                      <  1:498301/141‑1 (MQ=255)                                         atCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGa                                                                                                      <  1:210673/141‑1 (MQ=255)                                            gCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGatat                                                                                                   >  1:706666/1‑141 (MQ=255)                                              aaaGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATAttt                                                                                                 >  1:754484/1‑141 (MQ=255)                                              aaaGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATAttt                                                                                                 >  2:541413/1‑141 (MQ=255)                                              aaaGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATAttt                                                                                                 >  1:570727/1‑141 (MQ=255)                                                 gCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTc                                                                                              <  1:62009/141‑1 (MQ=255)                                                 gCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGAAAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTc                                                                                              >  2:792035/1‑141 (MQ=255)                                                   aaTGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATAttttt                                                                                               <  1:604269/138‑1 (MQ=255)                                                   aaTGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATAttttt                                                                                               >  2:604269/1‑138 (MQ=255)                                                    aTGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGt                                                                                           <  1:917115/141‑1 (MQ=255)                                                         tAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAAtt                                                                                      <  2:700200/141‑1 (MQ=255)                                                          aaGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAAttc                                                                                     <  2:499022/141‑1 (MQ=255)                                                           aGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAAttct                                                                                    <  1:475171/141‑1 (MQ=255)                                                           aGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAAttct                                                                                    <  2:835509/141‑1 (MQ=255)                                                                aaaaGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCAc                                                                               <  2:159803/141‑1 (MQ=255)                                                                 aaaGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACt                                                                              >  2:116301/1‑141 (MQ=255)                                                                  aaGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACtt                                                                             >  2:45302/1‑141 (MQ=255)                                                                    gAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCt                                                                           <  1:545396/141‑1 (MQ=255)                                                                    gAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCt                                                                           <  2:652576/141‑1 (MQ=255)                                                                     aaaTCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTACACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTg                                                                          <  2:778040/141‑1 (MQ=255)                                                                      aaTCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGc                                                                         <  1:658488/141‑1 (MQ=255)                                                                           aagaagAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAAtt                                                                    >  2:448481/1‑141 (MQ=255)                                                                           aagaagAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAAtt                                                                    >  2:448528/1‑141 (MQ=255)                                                                           aagaagAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAAtt                                                                    <  1:534410/141‑1 (MQ=255)                                                                            agaagaAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTg                                                                   >  1:895534/1‑141 (MQ=255)                                                                            agaagaAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTg                                                                   <  1:165696/141‑1 (MQ=255)                                                                             gaagaaAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGa                                                                  <  2:315499/141‑1 (MQ=255)                                                                              aagaaAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAg                                                                 >  1:440145/1‑141 (MQ=255)                                                                                 aaaaTAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCtt                                                              >  2:411552/1‑141 (MQ=255)                                                                                  aaaTAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTc                                                             >  2:101917/1‑141 (MQ=255)                                                                                   aaTAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCt                                                            >  1:829885/1‑141 (MQ=255)                                                                                     tAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTc                                                                            >  2:181227/1‑123 (MQ=255)                                                                                     tAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTc                                                                            <  1:181227/123‑1 (MQ=255)                                                                                      aGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTa                                                                                                                                         <  1:421217/61‑1 (MQ=255)                                                                                      aGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTa                                                                                                                                         >  2:421217/1‑61 (MQ=255)                                                                                       gATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTa                                                        <  2:764164/141‑1 (MQ=255)                                                                                                aCGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTg                                               >  1:627575/1‑141 (MQ=255)                                                                                                 cGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTgg                                              >  2:107848/1‑141 (MQ=255)                                                                                                  ggAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGc                                             >  1:893755/1‑141 (MQ=255)                                                                                                   gAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCt                                            >  2:287500/1‑141 (MQ=255)                                                                                                     aGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTa                                          >  1:650997/1‑141 (MQ=255)                                                                                                     aGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCGTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTa                                          >  2:878500/1‑141 (MQ=255)                                                                                                       cACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCTCTTCTGCCAATTGAGCTTCTGTTAATTCTAGTGGCTTaaa                                        <  2:154003/141‑1 (MQ=255)                                                                                                            gTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCta                                   >  2:716727/1‑141 (MQ=255)                                                                                                              aGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTGTATACtatt                                 >  2:267845/1‑140 (MQ=255)                                                                                                               ggTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTatat                                >  1:354852/1‑141 (MQ=255)                                                                                                               ggTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTatat                                >  2:377100/1‑141 (MQ=255)                                                                                                                gTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATAtt                               >  2:332771/1‑141 (MQ=255)                                                                                                                   aaaTAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTaa                            <  1:216240/141‑1 (MQ=255)                                                                                                                     aTAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAAc                          >  1:179263/1‑141 (MQ=255)                                                                                                                       aGTCTCCGTGCTTCCATTTTTTATTTTAAAAACTTCTTTCTAAACATCCATTCTTTTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCt                        <  2:744760/141‑1 (MQ=255)                                                                                                                       aGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCt                        <  2:235168/141‑1 (MQ=255)                                                                                                                        gTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCtt                       >  1:832064/1‑141 (MQ=255)                                                                                                                        gTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCtt                       <  2:217159/141‑1 (MQ=255)                                                                                                                         tCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCttt                      >  2:338859/1‑141 (MQ=255)                                                                                                                               tGCTTNCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAANTGGCTTAAATTCTATATTTAAACCTTTCTTaaa                <  1:136355/141‑1 (MQ=255)                                                                                                                                gCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTaaaa               >  1:799419/1‑141 (MQ=255)                                                                                                                                  ttCCGTTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAAcc             <  1:396468/141‑1 (MQ=255)                                                                                                                                  ttCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACtt                                                                             <  2:43206/77‑1 (MQ=255)                                                                                                                                  ttCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACtt                                                                             >  1:43206/1‑77 (MQ=255)                                                                                                                                   tCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCt            <  2:440145/141‑1 (MQ=255)                                                                                                                                   tCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCt            <  2:655017/141‑1 (MQ=255)                                                                                                                                    ccATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCtt           >  2:277675/1‑141 (MQ=255)                                                                                                                                       ttttttATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCTTtct        <  2:272191/141‑1 (MQ=255)                                                                                                                                        tttttATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCTTtctc       <  1:664783/141‑1 (MQ=255)                                                                                                                                         ttttATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCTTTCTCg      <  1:750062/141‑1 (MQ=255)                                                                                                                                           ttATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCTTTCTCGaa    <  1:411552/141‑1 (MQ=255)                                                                                                                                           ttATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCTTTCTCGaa    >  1:506026/1‑141 (MQ=255)                                                                                                                                           ttATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCTTTCTCGaa    >  1:507237/1‑141 (MQ=255)                                                                                                                                             aTTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATTTTTAAATCTTTCTTAAAACCTTTCTCGAAAg  <  1:674888/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                             ATTTATTATTTCTTCATCTTAACTGAAGACCAACGCAAATATCGCAAAGCAATGCGTAAGTATAAAAGAAATCAAAGAAGAAAATAGATAAAAAAACGGAAGCACTTGTAGGTAAAATAGTCTACGTGCTTCCATTTTTTATTCTAAAAACTACTTTCTAAACATCCATTCATCTGAACGATATTTTTCAGTTAATTCTTCCACTTCTGCCAATTGAGCTTCTGTTAATTCAAGTGGCTTAAATTCTATATTTAAACCTTTCTTAAAACCTTTCTCGAAAG  >  CP000730/1647484‑1647764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.