New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	920377 =	73 (0.920)	3 (0.040)	3/242	12.3	4.4%	coding (52/135 nt)	USA300HOU_0880	hypothetical protein
	?	CP000730	920443 =	65 (0.910)					coding (6/99 nt)	USA300HOU_0881	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGACATTGGTGATA  >  CP000730/920304‑920580                                                                                                                                            |                                                                                                                                           cGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTACTCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt                                                                                                                                           >  1:497227/1‑141 (MQ=255) cGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt                                                                                                                                           >  2:509400/1‑141 (MQ=255) cGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt                                                                                                                                           <  2:51708/141‑1 (MQ=255)  ccATCCCGCCAACACCATCCTGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGttt                                                                                                                                          <  1:132361/140‑1 (MQ=255)   cATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCCTACGACTTTTGTGGATTGCGTTTc                                                                                                                                         >  1:472654/1‑141 (MQ=255)    aTCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt                                                                                                                                        >  2:751774/1‑141 (MQ=255)    aTCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt                                                                                                                                        >  1:822545/1‑141 (MQ=255)       ccGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtt                                                                                                                                     >  1:373637/1‑141 (MQ=255)         gCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtttt                                                                                                                                   >  2:417079/1‑141 (MQ=255)          ccAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTa                                                                                                                                  <  1:882206/141‑1 (MQ=255)            aaCACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTAcc                                                                                                                                <  1:363795/141‑1 (MQ=255)               acCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt                                                                                                                             >  1:812000/1‑141 (MQ=255)                                 atcaatcaAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACAt                                                                                                          >  2:58496/1‑141 (MQ=255)                                  tcaatcaaATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATc                                                                                                         >  1:564962/1‑141 (MQ=255)                                    aatcaaATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACggtggaataac                                                                                                        >  2:254710/1‑131 (MQ=255)                                     atcaaATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAg                                                                                                      <  1:584195/141‑1 (MQ=255)                                     atcaaATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAg                                                                                                      >  1:515331/1‑141 (MQ=255)                                        aaaTTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTg                                                                                                   >  2:825733/1‑141 (MQ=255)                                         aaTTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGa                                                                                                  >  2:16807/1‑141 (MQ=255)                                               tcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCg                                                                                            >  2:558955/1‑141 (MQ=255)                                                caaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGc                                                                                           <  1:315966/141‑1 (MQ=255)                                                caaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGc                                                                                           <  1:915602/141‑1 (MQ=255)                                                  aatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCg                                                                                         >  2:839452/1‑141 (MQ=255)                                                    tcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGaa                                                                                       <  2:693695/141‑1 (MQ=255)                                                    tcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGaa                                                                                       >  2:605374/1‑141 (MQ=255)                                                     caTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGaaa                                                                                      <  2:292898/141‑1 (MQ=255)                                                      aTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAg                                                                                     >  1:355396/1‑141 (MQ=255)                                                       tGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGa                                                                                    >  1:484626/1‑141 (MQ=255)                                                              taaataaTCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAAt                                                                             <  1:207172/141‑1 (MQ=255)                                                                     tCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaa                                                                      <  2:822545/141‑1 (MQ=255)                                                                      cGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa                                                                     <  1:633578/141‑1 (MQ=255)                                                                      cGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa                                                                     <  1:633704/141‑1 (MQ=255)                                                                        aCCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaaa                                                                   >  1:179244/1‑141 (MQ=255)                                                                         ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAAc                                                                  >  1:609658/1‑141 (MQ=255)                                                                          cGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAAc                                                                  <  1:465468/141‑1 (MQ=255)                                                                            cAATCCACAAAAGCACAAGCACCACCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCACGCAAACACATc                                                               >  2:573706/1‑141 (MQ=255)                                                                               tCCACAAAAGCACAAGCACCACCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGAAAAAATATCaaa                                                            >  2:554618/1‑141 (MQ=255)                                                                                ccACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAAc                                                           <  2:523624/141‑1 (MQ=255)                                                                                 cacaAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAg                                                                                                      >  2:375439/1‑97 (MQ=255)                                                                                 cacaAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAg                                                                                                      <  1:375439/97‑1 (MQ=255)                                                                                  acaAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTa                                                         <  2:499012/141‑1 (MQ=255)                                                                                    aaaaGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTaaa                                                       >  2:891946/1‑141 (MQ=255)                                                                                     aaaGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCCCGTACATCAAACTAAAg                                                      >  1:49733/1‑141 (MQ=255)                                                                                          acaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt                                                                                                                                           >  2:520450/1‑52 (MQ=255)                                                                                          acaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt                                                                                                                                           <  1:520450/52‑1 (MQ=255)                                                                                          acaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGc                                                 >  2:749081/1‑141 (MQ=255)                                                                                           caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCt                                                >  1:64267/1‑141 (MQ=255)                                                                                            aagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGTTTTTCTTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTg                                               >  2:562021/1‑141 (MQ=255)                                                                                            aagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTg                                               <  2:497227/141‑1 (MQ=255)                                                                                             agcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGa                                              <  1:222096/141‑1 (MQ=255)                                                                                                 cccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATg                                          >  1:892884/1‑141 (MQ=255)                                                                                                 cccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATg                                          >  2:412710/1‑141 (MQ=255)                                                                                                  ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGa                                         <  2:373637/141‑1 (MQ=255)                                                                                                     cAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTa                                      >  1:248172/1‑141 (MQ=255)                                                                                                          attattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTAAAAACAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATa                                 <  2:593378/141‑1 (MQ=255)                                                                                                          attattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATAAAAAAAAAAAAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATa                                 <  2:593404/141‑1 (MQ=255)                                                                                                           ttattTTAGTGCTTGCCATTTTTTTTTTTTTTTTTTCTATTTTACCACTTTAATCAAACG‑AAATTGTCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAATTTAAGTTCGCTGAAATTATTTTGATaa                                >  2:42255/1‑141 (MQ=255)                                                                                                           ttattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATaa                                >  2:440560/1‑141 (MQ=255)                                                                                                             attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATaaaa                              >  1:856132/1‑141 (MQ=255)                                                                                                              ttttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAg                             >  1:305688/1‑141 (MQ=255)                                                                                                               tttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGt                            <  1:682051/141‑1 (MQ=255)                                                                                                                       ttGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGt                    <  1:825733/141‑1 (MQ=255)                                                                                                                            aTTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTatgat               <  1:412710/141‑1 (MQ=255)                                                                                                                            aTTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTatgat               <  2:573210/141‑1 (MQ=255)                                                                                                                             tttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTatgatg              >  1:670317/1‑141 (MQ=255)                                                                                                                              ttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTAtgatga             <  1:417079/141‑1 (MQ=255)                                                                                                                              ttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTAtgatga             <  2:484626/141‑1 (MQ=255)                                                                                                                              ttttGTGGATTGCATTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGAAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTAtgatga             <  2:472654/141‑1 (MQ=255)                                                                                                                              tttagaagATTGCGCATCTATATTACCAATTTAAACAAACA‑AGAACAACAATCTGAAGATCGCCGAAAGATTTAAAAAAAAAAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTAtgatga             <  2:880832/134‑1 (MQ=255)                                                                                                                               tttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGAc            >  1:531699/1‑141 (MQ=255)                                                                                                                               tttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATAAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGAc            <  2:355396/141‑1 (MQ=255)                                                                                                                                ttGTGGATTGCGTTTCTATTTTACCACTTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGACa           <  2:726227/141‑1 (MQ=255)                                                                                                                                  gtgGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGACAtt         <  1:246777/141‑1 (MQ=255)                                                                                                                                    ggATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGACATTgg       <  1:107713/141‑1 (MQ=255)                                                                                                                                     gATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGACATTGGt      >  1:1167/1‑141 (MQ=255)                                                                                                                                       ttGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGACATTGGTGa    <  1:440560/141‑1 (MQ=255)                                                                                                                                         gCGTTTCTATTTTACCAATATAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGACATTGGTGata  <  2:455564/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                           CGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACG‑AAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATGACATTGGTGATA  >  CP000730/920304‑920580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.