Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	662004	662036	33	2 [1]	[1] 2	USA300HOU_0603	hypothetical protein

GTATGTTATTAACTTTAAATCCTCAAAATATAATAGGCTTTATTGGTTGGTTGGTAATGACTGCAGGTTTCTTTCTGTTAAACATGTCATCGATTATTGACAAAAAAATTTATGTATTATCTAAAACTAACACGGTGGAAAAATGATGGTT  >  CP000730/662027‑662177           |                                                                                                                                             gTATGTTATTAACTTTAAATCCTCAAAATATAACCGGCCTTATTGGCAGGAAACATATGTCCACCGGCTTTTTTTTCGTAAAGAGGTTAACGAGTACTGACGAAAAAATGTATGTATTATCTAAAACTAACACGGTGGaaa            >  1:39167/1‑141 (MQ=255)           aaCTTTAAATCCTCAAAATATAATAGGCTTTATTGGTTGGTTGGTAATGACTGCAGGTTTCTTTCTGTTAAACATGTCATCGATTATTGACAAAAAAATTTATGTATTATCTAAAACTAACACGGTGGAAAAATGATGGtt  >  1:57972/1‑141 (MQ=255)           |                                                                                                                                             GTATGTTATTAACTTTAAATCCTCAAAATATAATAGGCTTTATTGGTTGGTTGGTAATGACTGCAGGTTTCTTTCTGTTAAACATGTCATCGATTATTGACAAAAAAATTTATGTATTATCTAAAACTAACACGGTGGAAAAATGATGGTT  >  CP000730/662027‑662177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑