Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	1581718	1581750	33	2 [1]	[1] 2	USA300HOU_1450	possible bacteriophage capsid protein

TAGCAAATGGTTCTGAAACAATTTCTTTAGAAAGTGTTTTTGGTAAGAGCTTATCTCCACCTGAATCATTTCCTGTTGGTAAAGCGTGTAATAAACGTTGTGCCTCCATTGAAGGTTTTTCAAATTCATTTGGTAAAATCGCGT  >  CP000730/1581577‑1581720                                                                                                                                             |    tAGCAAATGGTTCTGAAACAATTTCTTTAGAAAGTGTTTTTGGTAAGAGCTTATCTCCACCTGAATCATTTCCTGTTGGTAAAGCGTGTAATAAACGTTGTGCCTCCATTGAAGGTTTTTCAAATTCATTTGGTAAAATcg     <  1:55574/141‑1 (MQ=255)    cAAATGGTTCTGAAACAATTTCTTTAGAAAGTGTTTTTGGTAAGAGCTTATCTCCACCTGAATCATTTCCTGTTGGTAAAGCGTGTAATAAACGTTGTGCCTCCATTGAAGGTTTTTCAAGTTCTTTTGGTAAAATCGCGt  >  2:17419/1‑141 (MQ=255)                                                                                                                                             |    TAGCAAATGGTTCTGAAACAATTTCTTTAGAAAGTGTTTTTGGTAAGAGCTTATCTCCACCTGAATCATTTCCTGTTGGTAAAGCGTGTAATAAACGTTGTGCCTCCATTGAAGGTTTTTCAAATTCATTTGGTAAAATCGCGT  >  CP000730/1581577‑1581720

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑