New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2440052	46 (0.840)	5 (0.100)	5/230	NT	10.5%	intergenic (+13/+53)	USA300HOU_2302/glvC	hypothetical protein/PTS family arbutin‑salicin‑cellobiose (ASC) porter component IIBC
	?	CP000730	= 2440086	44 (0.880)					intergenic (+47/+19)	USA300HOU_2302/glvC	hypothetical protein/PTS family arbutin‑salicin‑cellobiose (ASC) porter component IIBC

TCATGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACCTACTACAACTTGGATA  >  CP000730/2439913‑2440192                                                                                                                                            |                                                                                                                                             tcATGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGGTACATACGATTGCAACTAGAAATATCGACAGTCTAGCTGCCAATTATAGATCGGCATCTAGGAGCAAAGCGCGTAGATCATAATAAAAGACACATCt                                                                                                                                             >  2:325466/1‑141 (MQ=255)   aTGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCtat                                                                                                                                           <  2:336632/141‑1 (MQ=255)   aTGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCtat                                                                                                                                           <  2:700918/141‑1 (MQ=255)       acaTATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACga                                                                                                                                       >  1:208736/1‑141 (MQ=255)        caTATTATATGTACGCCAGAAATATTTGCTAAATTTTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACgat                                                                                                                                      >  2:24947/1‑141 (MQ=255)        caTATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACgat                                                                                                                                      >  1:650304/1‑141 (MQ=255)        caTATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACgat                                                                                                                                      <  2:353879/141‑1 (MQ=255)          tattatATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACgatga                                                                                                                                    <  1:403954/141‑1 (MQ=255)            ttatATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATc                                                                                                                                  >  2:489196/1‑141 (MQ=255)            ttatATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATc                                                                                                                                  >  2:67268/1‑141 (MQ=255)             tataTGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCAATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCa                                                                                                                                 >  2:606750/1‑141 (MQ=255)                atGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATCATCAttt                                                                                                                              >  2:549309/1‑141 (MQ=255)                  gTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCactatacgcaatcattgt                                                                                                                            <  2:558694‑M1/141‑19 (MQ=255)                    aCGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACaa                                                                                                                          >  2:686186/1‑141 (MQ=255)                     cGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAAt                                                                                                                         >  1:513873/1‑141 (MQ=255)                       ccAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGa                                                                                                                       >  1:199990/1‑141 (MQ=255)                       ccAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGa                                                                                                                       <  2:650304/141‑1 (MQ=255)                         aGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGAtt                                                                                                                     <  1:13334/141‑1 (MQ=255)                            aaTATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCg                                                                                                                  <  1:6709/141‑1 (MQ=255)                             atatTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGt                                                                                                                 >  1:430334/1‑141 (MQ=255)                                 ttGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAAAAAAAGACACATCactatacgcaatcattgtaaatgatcatcgtat                                                                                                             <  1:271776‑M1/141‑34 (MQ=255)                                   gCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTg                                                                                                           <  2:499229‑M2/141‑2 (MQ=255)                                    cTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCactatacgcaatcattgtaaatgatcatcgtataga                                                                                                          <  1:280272‑M1/141‑37 (MQ=255)                                       aaTTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCactatacgcaatcattgtaaatgatcatcgtatagatgt                                                                                                       <  1:269614‑M1/141‑40 (MQ=255)                                       aaTTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTgatgt                                                                                                       >  2:675054‑M2/1‑136 (MQ=255)                                        aTTGTTACATACGATTGCAAGTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtg                                                                                                      >  2:710702‑M2/1‑135 (MQ=255)                                         ttGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtgt                                                                                                     >  2:3587‑M2/1‑134 (MQ=255)                                         ttGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtgt                                                                                                     >  2:631367‑M2/1‑134 (MQ=255)                                         ttGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAAGTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtgt                                                                                                     <  1:174183‑M2/141‑8 (MQ=255)                                          tGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCactatacgcaatcattgtaaatgatcatcgtatagatgtgtc                                                                                                    <  1:302362‑M1/141‑43 (MQ=255)                                          tGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtc                                                                                                    >  1:222094‑M2/1‑133 (MQ=255)                                           gTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGCTCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtct                                                                                                   <  1:364711‑M2/141‑10 (MQ=255)                                           gTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtct                                                                                                   >  1:397047‑M2/1‑132 (MQ=255)                                                   cGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGt                                                                                           <  2:153411/141‑1 (MQ=255)                                                      ttGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGtatt                                                                                        >  2:339548/1‑141 (MQ=255)                                                             tAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATc                                                                                 >  1:111806/1‑141 (MQ=255)                                                                aaaTATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTc                                                                              >  2:625558/1‑141 (MQ=255)                                                                aaaTATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTc                                                                              <  1:289577/141‑1 (MQ=255)                                                                   tatCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGa                                                                           >  1:660696/1‑141 (MQ=255)                                                                   tatCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGa                                                                           <  1:98697/141‑1 (MQ=255)                                                                   tatCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGa                                                                           <  2:159839/141‑1 (MQ=255)                                                                      cGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGa                                                                        <  2:399992/141‑1 (MQ=255)                                                                           ttCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGAt                                                                   <  1:606750/141‑1 (MQ=255)                                                                                  tGCAAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAAc                                                            <  2:654251/141‑1 (MQ=255)                                                                                     cAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCAt                                                         >  1:453586/1‑141 (MQ=255)                                                                                        ttATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTg                                                      >  2:40937/1‑141 (MQ=255)                                                                                         tataGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGt                                                     >  2:120417/1‑141 (MQ=255)                                                                                          ataGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGtt                                                    <  2:607341/141‑1 (MQ=255)                                                                                            aGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTNCGGACGATTGATNCTCAACCATTTGTTCa                                                  <  1:449929/141‑1 (MQ=255)                                                                                                     tCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCa                                         <  1:316928/141‑1 (MQ=255)                                                                                                         ttagtaaaGCTCGTATATCATAATAAAAGACACATCTATACGATGATTATTTACAATGATTGCGTATATTGATGTGTCTTTTTTTGTATTATTTAGCTTCGGTCGAGGGATCTGCAACCATGTGTTCAGATGCTTTACgga                                     <  2:240095/136‑3 (MQ=255)                                                                                                           aGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATTGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATACTCAACCATTTGTTCAAATTCTTCACGAACt                                   >  2:517317/1‑141 (MQ=255)                                                                                                             cAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTtg                                 <  2:82410/141‑1 (MQ=255)                                                                                                                  cTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTATGGTa                            >  2:161427/1‑141 (MQ=255)                                                                                                                      tataTCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAGCTTGTGGTACTGt                        <  2:236125/141‑1 (MQ=255)                                                                                                                       atatCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTc                       <  2:14963/141‑1 (MQ=255)                                                                                                                               ataaAAGATACATCTAGACGATGATCATTTACTATGATTGCGTATAGTTATGTGTCTTTTTTTGTATTATTTATCTTCGTACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACctac               <  2:664872/141‑1 (MQ=255)                                                                                                                               ataaAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACctac               <  1:346749/141‑1 (MQ=255)                                                                                                                                    aGACACATCactatacgcaatcattgtaaatgatcatcgtatagatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaac          >  1:397047‑M1/1‑9 (MQ=255)                                                                                                                                    aGACACATCactatacgcaatcattgtaaatgatcatcgtatagatgtgtcttttattatgatatacgagctttgctcatagatgacgagctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaac          <  1:364711‑M1/141‑133 (MQ=255)                                                                                                                                    aGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTTTTTTTTTTTTCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTTCTTTCATACCTACTACaa          >  2:554336/1‑141 (MQ=255)                                                                                                                                    aGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACCTACTACaa          >  1:136285/1‑141 (MQ=255)                                                                                                                                     gACACATCactatacgcaatcattgtaaatgatcatcgtatagatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaaca         >  1:222094‑M1/1‑8 (MQ=255)                                                                                                                                     gACACATCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaaca         <  1:302362‑M2/141‑100 (MQ=255)                                                                                                                                      acacATCactatacgcaatcattgtaaatgatcatcgtatagatgtgtcttttattatgatatacgagctttgctcatagatgacgatctatacttggcagatagaatgtcgatatttctagttgcaatcgtatgtaacaa        <  1:174183‑M1/141‑135 (MQ=255)                                                                                                                                      acacATCactatacgcaatcattgtaaatgatcatcgtatagatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaacaa        >  2:3587‑M1/1‑7 (MQ=255)                                                                                                                                      acacATCactatacgcaatcattgtaaatgatcatcgtatagatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaacaa        >  2:631367‑M1/1‑7 (MQ=255)                                                                                                                                      acacATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACCTACTACAACt        >  2:258365/1‑141 (MQ=255)                                                                                                                                      acacATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACCTACTACAACt        >  1:538904/1‑141 (MQ=255)                                                                                                                                       cacaTCactatacgcaatcattgtaaatgatcatcgtatagatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctacttgcaatcgtatgtaacaat       >  2:710702‑M1/1‑6 (MQ=255)                                                                                                                                       cacaTCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACCTACTACAACtt       >  1:174128/1‑141 (MQ=255)                                                                                                                                        acaTCactatacgcaatcattgtaaatgatcatcgtatagatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaacaatt      >  2:675054‑M1/1‑5 (MQ=255)                                                                                                                                        acaTCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaacaatt      <  1:269614‑M2/141‑103 (MQ=255)                                                                                                                                          aTCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACCTACTACAACTTGGa    <  1:320106/141‑1 (MQ=255)                                                                                                                                           tCTATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaacaatttag   <  1:280272‑M2/141‑106 (MQ=255)                                                                                                                                            cactatacgcaatcattgtaaatgatcatcgtatagatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataattggcagatagaatgtcgatatttctagttgcaatcgtatgtaacaatttagc  <  2:499229‑M1/141‑141 (MQ=255)                                                                                                                                            |                                                                                                                                             TCATGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACCTACTACAACTTGGATA  >  CP000730/2439913‑2440192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.