| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 895725 | 55 (1.000) | 3 (0.060) | 3/240 | NT | 5.2% | coding (746/822 nt) | metQ | ABC superfamily ATP binding cassette transporter, binding protein |
| ? | CP000730 | = 895759 | 57 (1.100) | coding (780/822 nt) | metQ | ABC superfamily ATP binding cassette transporter, binding protein | |||||
ATCATTAATTCGAACTTTGCAATCGAACAAAAACTAAATCCTAAAAAAGATTCTATTGCTGTAGAAAGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/895580‑895725‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattaatGAAGTCTTGAATATCTTTAGATTGTAATACTTCAATTAATGCTTTGATTTTCTTATCATCTTGATGTCCTTCTTTAACAGCAATTAAGTTTGCATAAGGATTATCTTTCGCACTTTCTACAGCAATAGAATCTTTTTT < CP000730/895759‑895622 ATCATTAATTCGAACTTTGCAATCGAACAAAAACTAAATCCTAAAAAAGATTCTATTGCTGTAGAAAGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCA < 2:270064/141‑1 CATTAATTCGAACTTTGCAATCGAACAAAAACTAAATCCTAAAAAAGATTCTATTGCTGTAGAAAGTGCGAAAGATAATCCTTATGCCAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATT < 2:709962/141‑1 AAAAGATTCTATTGCTGTAGAAAGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATGAAGTCTTGAATATCTTTAGATTGTAATACTTCAATTAA < 1:685263/141‑1 TTCTATTGCTGTAGAAAGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATGAAGTCTTGAATATCTTTAGATTGTAATACTTCAATTAATGCTTT > 1:707943/1‑141 TCTATTGCTGTAGAAAGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATGAAGTCTTGAATATCTTTAGATTGTAATACTTCAATTAATGCTTTG < 2:707943/141‑1 AATGAAGTCTTGAATATCTTTAGATTGTAATACTTCAATTAATGCTTTGATTTTCTTATCATCTTGATGTCCTTCTTTAACAGCAATCAAGTTTGCATAAGGATTATCTTTCGCACTTTCTACAGCAATAGAATCTTTTTT > 2:351987/1‑141 ATCATTAATTCGAACTTTGCAATCGAACAAAAACTAAATCCTAAAAAAGATTCTATTGCTGTAGAAAGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/895580‑895725‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattaatGAAGTCTTGAATATCTTTAGATTGTAATACTTCAATTAATGCTTTGATTTTCTTATCATCTTGATGTCCTTCTTTAACAGCAATTAAGTTTGCATAAGGATTATCTTTCGCACTTTCTACAGCAATAGAATCTTTTTT < CP000730/895759‑895622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |