New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_012417 = 2937740 (0.900)9 (0.010) 7/270 42.5 1.3% intergenic (‑263/–) USA300HOU_RS14900/– hypothetical protein/–
?NC_012417 = 2949 687 (0.860)intergenic (‑275/–) USA300HOU_RS14900/– hypothetical protein/–
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012417/2794‑2937
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaacTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  <  NC_012417/2949‑2810
                                                                                                                                                                                                                                                                                            
TTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGA                                                                                                                                                 <  1:16051/141‑1
TTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGA                                                                                                                                                 <  1:170786/141‑1
TTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGA                                                                                                                                                 <  2:23542/141‑1
TTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGA                                                                                                                                                 >  1:279345/1‑141
TTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGA                                                                                                                                                 <  2:223409/141‑1
TTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGATTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGA                                                                                                                                                 >  2:290287/1‑141
TTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATCTAGGTTTAGAGGGTCATAAAATGAAGAAGGAATAGGTTGTTTTTTGA                                                                                                                                                 >  2:212418/1‑141
 TAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAA                                                                                                                                                <  1:62072/141‑1
 TAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAA                                                                                                                                                <  1:120091/141‑1
 TAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAA                                                                                                                                                >  2:107492/1‑141
  AATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAA                                                                                                                                               >  1:123484/1‑141
  AATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAA                                                                                                                                               >  2:267363/1‑141
  AATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAA                                                                                                                                               >  2:167746/1‑141
  AATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAA                                                                                                                                               >  2:212444/1‑141
   tTTTTTTTTTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTATTTTTTTTATTTTTAGAGGTTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC                                                                                                                                              >  2:169171/2‑141
   ATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAtt                                                                                                                                              >  2:58288/1‑139
   ATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC                                                                                                                                              >  2:169189/1‑141
   ATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC                                                                                                                                              >  2:171907/1‑141
   ATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC                                                                                                                                              <  2:231803/141‑1
   ATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC                                                                                                                                              <  2:238542/141‑1
   ATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC                                                                                                                                              >  2:55771/1‑141
   ATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC                                                                                                                                              <  2:59405/141‑1
   ATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC                                                                                                                                              <  1:229642/141‑1
     TTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTTTTTTTTTTTTTTTATTCATTGGTTTTCACATTAATTTTTTTTGGTTTAGAGGGTCATAAAAAGAAGTAGGCATAGGTTGTTTTTTGtttcgt                                                                                                                                            >  2:305008/1‑135
          ATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACTCGTTCA                                                                                                                                       <  1:72408/141‑1
          ATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTAAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACTCGTTCA                                                                                                                                       <  2:290745/141‑1
           TTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACTCGTTCAC                                                                                                                                      <  2:178716/141‑1
             TTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACTCGTTCACAC                                                                                                                                    <  1:229417/141‑1
             TTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACTCGTTCACAC                                                                                                                                    <  2:110813/141‑1
              TGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACTCGTTCACACT                                                                                                                                   <  1:77193/141‑1
                              TTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACTCGTTCACACTCGTTTCAAAAAACAAC                                                                                                                   <  1:254559/141‑1
                                          TTTTACTTTTTAGAAAGTTTTATTAATTCAATGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGGATAGGTGATTTTTTGAAACTCTTTCACGCTCGTTTCAAAAAACAACCTATTCCTTCTT                                                                                                       <  2:213679/141‑1
                                                       AAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCC                                                                                          <  1:18334/141‑1
                                                                                                                                           GAAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAGTAAAATCGAA      <  2:187519/141‑1
                                                                                                                                           GAAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAA      >  2:280864/1‑141
                                                                                                                                           GAAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAA      >  2:119176/1‑141
                                                                                                                                           GAAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAA      <  2:264666/141‑1
                                                                                                                                           GAAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAA      >  1:270261/1‑141
                                                                                                                                           GAAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAA      >  2:42110/1‑141
                                                                                                                                           GAAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAA      <  2:191997/141‑1
                                                                                                                                           GAAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAA      >  2:52456/1‑141
                                                                                                                                           GAAACTCGTCCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAA      >  1:268111/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTTTTTTTTTTTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  2:174154/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  2:243863/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  1:157845/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  2:219486/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  1:15095/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  2:35389/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  1:114642/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  1:278942/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  1:281798/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  2:150189/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  2:134159/1‑141
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     <  1:98541/141‑1
                                                                                                                                            AAACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  1:300448/1‑141
                                                                                                                                            AAACGCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTTTTTTTTTTTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAAT     >  2:244335/1‑141
                                                                                                                                             AACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATT    >  1:59222/1‑141
                                                                                                                                             AACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATT    >  2:162835/1‑141
                                                                                                                                             AACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATT    <  2:39652/141‑1
                                                                                                                                             AACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCAAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATT    >  2:304304/1‑141
                                                                                                                                              ACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTA   >  1:117351/1‑141
                                                                                                                                              ACTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTA   >  1:126675/1‑141
                                                                                                                                               CTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  >  2:29979/1‑141
                                                                                                                                               CTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  >  1:30413/1‑141
                                                                                                                                               CTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  >  2:41867/1‑141
                                                                                                                                               CTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  >  1:185549/1‑141
                                                                                                                                               CTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  >  2:247607/1‑141
                                                                                                                                               CTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  >  1:57564/1‑141
                                                                                                                                               CTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  >  1:205201/1‑141
                                                                                                                                               CTCGTTCACACACATTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  <  2:110419/141‑1
                                                                                                                                                                                                                                                                                            
TTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012417/2794‑2937
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaacTCGTTCACACTCGTTTCAAAAAACAACCTATTCCTTCTTCTTTTTATGACCCTCTAAACCTAAATAAATTAATGTGAAAACCAATGAATAAATAAAACTTTCTAAAAAGTCAAAAGGATTATCAAATAAAATCGAATTAA  <  NC_012417/2949‑2810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.