| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,391,457 | C→T | 5.4% | A95A (GCG→GCA) | moaE ← | Molybdopterin synthase catalytic subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,391,457 | 0 | C | T | 5.4% | 404.7 / 8.5 | 129 | A95A (GCG→GCA) | moaE | Molybdopterin synthase catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base C (69/52); new base T (4/3); total (74/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.46e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
TCATAATTCCCTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGAATATACGCTTCATA > USA300TCH1516_ALE/2391317‑2391597 | tcATAATTCCCTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAAcc > 1:505833/1‑141 (MQ=255) cATAATTCCCTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCg < 2:72016/141‑1 (MQ=255) tAATTCCCTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACTGCa > 1:803811/1‑141 (MQ=255) aaTTCCCTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCaa < 1:3922/141‑1 (MQ=255) aTTCCCTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAAt < 1:1075853/141‑1 (MQ=255) aTTCCCTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATGGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAAt > 2:98682/1‑141 (MQ=255) cccTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTaa < 1:1048056/141‑1 (MQ=255) cccTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTaa < 3:436311/141‑1 (MQ=255) cccTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTaa > 1:298890/1‑141 (MQ=255) ccTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAAt > 1:583136/1‑141 (MQ=255) ccTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAAt > 1:403704/1‑141 (MQ=255) cTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGTTGAAGAAACCGCAATTAATa > 2:642704/1‑141 (MQ=255) cTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATa > 1:842756/1‑141 (MQ=255) cTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATa > 1:454147/1‑141 (MQ=255) tttttGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACTGCAATTAATAc > 2:60147/1‑141 (MQ=255) gATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGa > 1:854631/1‑141 (MQ=255) tGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGata > 3:110123/1‑141 (MQ=255) gCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCCATTAATACAGCGatat > 3:150671/1‑141 (MQ=255) gCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGatat < 1:1060841/141‑1 (MQ=255) gCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGatat > 1:743337/1‑141 (MQ=255) gCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGatat > 4:272466/1‑141 (MQ=255) tttttttcATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATTTTCATTTTCTCTATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATc > 2:342018/8‑141 (MQ=255) cccTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATc < 3:435756/141‑1 (MQ=255) aTTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAAttt < 4:251073/141‑1 (MQ=255) ttGAACCATCTTCCCAAATTTCTTTTTACAAAATCGGAACAATTTCTTTTATACGCTCAATTGTATATTCATTTGCTCGATAGGCCTCTTTACGTTGCGGTGAAGAAACCGCAATTAATACAGCGATATGTGGAATTTGTa > 2:981673/1‑141 (MQ=255) tGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTaa > 1:894833/1‑141 (MQ=255) gAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAAt > 2:121955/1‑141 (MQ=255) aaCCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATg < 1:745341/141‑1 (MQ=255) ccATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGc < 2:97508/141‑1 (MQ=255) ccATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGc < 2:642713/141‑1 (MQ=255) ccATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGc > 2:799914/1‑141 (MQ=255) ccATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGc < 1:175861/141‑1 (MQ=255) cATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGcc > 2:900929/1‑141 (MQ=255) cATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGcc > 2:395997/1‑141 (MQ=255) aTCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGccc > 1:237003/1‑141 (MQ=255) aTCTACCCAAATTTCTTTTTTCCAAATCGGAACAACTTCTTTTATATGCTAAATTGCATATTCACTTCCTCGATACGCATCTTTACGATGCGGTGAAGAAACAGCAATTCATACAGCGATATCTGAATTTTGTTATgtcgc > 2:1033289/1‑137 (MQ=255) cTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTa < 2:681519/141‑1 (MQ=255) cAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTa > 3:18423/1‑141 (MQ=255) cAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTa > 1:920831/1‑141 (MQ=255) aaaTTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTAt > 1:751863/1‑141 (MQ=255) aaTTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATg > 3:192605/1‑141 (MQ=255) aaTTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATg < 2:225154/141‑1 (MQ=255) aTTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGa < 3:156041/141‑1 (MQ=255) ttttttCCAAATCGGAACAATTTCTTTTATACGCTCCATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAAt < 1:650477/141‑1 (MQ=255) ttttttCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAAt > 2:335322/1‑141 (MQ=255) ttttttCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAAt > 1:304445/1‑141 (MQ=255) ttttCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATAc < 1:686980/141‑1 (MQ=255) ttttCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATAc > 1:931669/1‑141 (MQ=255) tttCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACt < 2:836959/141‑1 (MQ=255) tCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCg > 3:345739/1‑141 (MQ=255) ccAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGt > 2:517730/1‑141 (MQ=255) aaTCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTGTGAACAATACTCGTTAt > 1:8793/1‑141 (MQ=255) aaTCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTAt > 1:887505/1‑141 (MQ=255) aaTCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTAt > 1:587140/1‑141 (MQ=255) aTCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGCACAATACTCGTTATc < 2:496144/141‑1 (MQ=255) aTCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATc > 3:71583/1‑141 (MQ=255) aaCAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATATGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAACTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTcc > 4:242323/1‑141 (MQ=255) aaCAATTTCTTGTCTTCGCTCCATTGCATATTCATTTGCTGGAGAGGCATCTTTACGATGCGGTGGAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTATTCGCCCTATTCTATGAACAATACTCGTTATCGTTcc < 4:132978/141‑1 (MQ=255) cAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAg > 1:353933/1‑141 (MQ=255) aTTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACTGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGc < 4:170766/141‑1 (MQ=255) aTTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGc < 1:501209/141‑1 (MQ=255) tttCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGcc < 2:901350/141‑1 (MQ=255) ttCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCa > 1:108258/1‑141 (MQ=255) cTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCAtt > 2:128434/1‑141 (MQ=255) tataCGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTc > 3:364840/1‑141 (MQ=255) aCGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCatt > 1:80014/1‑141 (MQ=255) aCGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCatt < 2:893407/141‑1 (MQ=255) gCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCattta > 1:608857/1‑141 (MQ=255) ttGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCAt > 1:818681/1‑141 (MQ=255) cATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCAtctc > 2:514328/1‑141 (MQ=255) cATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCAtctc > 1:39214/1‑141 (MQ=255) cATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCAtctc > 1:346687/1‑141 (MQ=255) cATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAAGTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCAtctc > 4:124698/1‑141 (MQ=255) atatTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTcc > 1:747835/1‑141 (MQ=255) tCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAAtt < 3:313197/141‑1 (MQ=255) tttGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATATCCAATTtgt > 2:373740/1‑141 (MQ=255) cTCGATAGGCATCTTTACGATGCGGTGAAGAAACTGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCa > 1:38951/1‑141 (MQ=255) cGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAAt < 4:147563/141‑1 (MQ=255) tAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTc > 4:35810/1‑141 (MQ=255) tAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTc > 2:276603/1‑141 (MQ=255) cATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCtttt < 3:185543/141‑1 (MQ=255) cATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCcttt < 2:140846/141‑1 (MQ=255) aTCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTc > 1:636553/1‑141 (MQ=255) cTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAg < 1:342018/141‑1 (MQ=255) cTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAg > 1:174239/1‑141 (MQ=255) tttACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGc < 2:505833/141‑1 (MQ=255) cGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCAtt > 2:747930/1‑141 (MQ=255) aTGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCATTTTGTGCCAATTTCTTTTCAGCCATTgg < 1:869265/141‑1 (MQ=255) aTGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTgg < 1:268491/141‑1 (MQ=255) aTGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTACGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTgg > 2:384167/1‑141 (MQ=255) tGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGa < 3:411277/141‑1 (MQ=255) gCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGaa < 3:223756/141‑1 (MQ=255) cGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGAat < 2:237003/141‑1 (MQ=255) ggTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGCata > 4:328972/1‑141 (MQ=255) gTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGAatat > 1:795080/1‑141 (MQ=255) gTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGAatat < 3:16050/141‑1 (MQ=255) gaaACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGAATATACGCt < 4:199335/141‑1 (MQ=255) aaCCGCAATTAATACAGCGATATCTGGAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGAATATACGCTTc < 2:861079/141‑1 (MQ=255) aCCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCACTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCACCTATTTGTTCCAATTTCTTTTCAGGCATTGGAATATACGCTTCa < 4:314926/141‑1 (MQ=255) cGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGAATATACGCTTCata > 2:202862/1‑141 (MQ=255) | TCATAATTCCCTTTTTGATGCCCTTGCCATTTTGAACCATCTTCCCAAATTTCTTTTTTCCAAATCGGAACAATTTCTTTTATACGCTCAATTGCATATTCATTTGCTCGATAGGCATCTTTACGATGCGGTGAAGAAACCGCAATTAATACAGCGATATCTGAAATTTGTAATGGCCCTATTCTATGAACAATACTCGTTATCGTTCCAGGCCATTTTTCATTTATTTCATCTCCAATTTGTGCCAATTTCTTTTCAGCCATTGGAATATACGCTTCATA > USA300TCH1516_ALE/2391317‑2391597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |