| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2444885 | 289 (0.810) | 15 (0.050) | 10/140 | NT | 5.4% | intergenic (‑38/+187) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2444897 | 276 (0.880) | intergenic (‑50/+175) | mleN_2/USA300HOU_RS12595 | Malate‑2H(+)/Na(+)‑lactate antiporter/hypothetical protein | |||||
Only 100 of 124 total aligned reads displayed.
AACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2444786‑2444885‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctctttctTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTATTC < USA300TCH1516_ALE/2444897‑2444809 AACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATA < 1:5917698/91‑1AACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATA > 1:6073059/1‑91 ACGCCACAAATACTAACAAGGGGAATAATGCCCAACAATTGCTCTTTTTTTGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATAC < 2:3761401/91‑1 ACGCCACAAATAATAACATGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATAC < 1:6888318/91‑1 ACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTTTTTTTTTTTTTCCTTTTTACCTGCTTTCCAATTAAAAATAt > 2:687020/1‑90 ACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATAC < 1:1008593/91‑1 ACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATAC < 1:4297897/91‑1 ACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATAC < 2:1261017/91‑1 ACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATAC < 1:4352474/91‑1 ACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATAC > 1:184828/1‑91 ACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATAC < 2:3200812/91‑1 ACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATAC < 2:3200019/91‑1 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATTTATTTCTATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 2:121881/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 1:6118397/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 1:5018913/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 1:5913747/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 2:3578458/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC < 2:4056148/91‑1 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 2:508827/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 2:2125453/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 2:3226241/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 2:1185256/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 2:2078011/1‑91 CGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACC > 2:2077609/1‑91 GCCACTAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTCTTTACCTGCTTTCCAATTAAAAATACCT < 2:6704144/91‑1 GCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCT > 2:2288313/1‑91 GCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCT > 1:3789951/1‑91 GCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCT > 1:4733925/1‑91 CCACAAATAATAACAAGGGGAATAATGCCCAAGCGTTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTC > 2:4139062/1‑91 CCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTC > 1:4306673/1‑91 CCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTC > 1:4781866/1‑91 CCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTC > 2:6140370/1‑91 ccCAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCT > 1:3173021/3‑91 CACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCT < 1:5497277/91‑1 CACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCT < 2:2682942/91‑1 CACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCT < 2:5291277/91‑1 CACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCT > 1:454879/1‑91 CACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCT > 2:484589/1‑91 CACAAATAATAACAAGGGGAATAATGCCCAAGCATAGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCT > 1:4953837/1‑91 ACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTT < 2:2146113/91‑1 ACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTT > 2:271310/1‑91 ACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTT > 1:4970889/1‑91 ACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTT > 1:2387863/1‑91 CAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTT > 2:4525991/1‑91 CAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTT < 2:6583540/91‑1 CAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTT < 2:5107545/91‑1 AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCT < 1:5702197/91‑1 AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCT < 1:121346/91‑1 AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCT < 1:3829740/91‑1 AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCT > 2:5906372/1‑91 AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCT < 2:6111611/91‑1 AATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCT > 2:6423520/1‑91 GGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTTCATCGTTTGT < 2:6994643/91‑1 GGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTTCATCGTTTGTGA < 1:5338448/91‑1 GGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTTCATCGTTTGTGA < 1:5338176/91‑1 AATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTTCATCGTTTGTGAGA < 1:2111023/91‑1 ATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTTCATCGTTTGTGAGAA < 1:4242038/91‑1 GCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTTCATCGTTTGTGAGAAAGAGG < 2:440999/91‑1 GCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTTCATCGTTTGTGAGAAAGAGG < 1:1120573/91‑1 CCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCTTCATCGTTTGTGAGAAAGAGGT < 1:2246851/91‑1 CCTTTTTACCTGCTTTCGAATTAAAAATACCTCTTTCTGCAACGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATG < 2:660660/91‑1 TTAAAAATACCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAA < 1:721510/91‑1 ACCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAACAGAGCAATGCTTGGG > 2:251179/1‑91 ACCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGG > 2:693454/1‑91 ACCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGG > 1:792647/1‑91 ACCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGG > 2:2455234/1‑91 ACCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGG > 1:254457/1‑91 CCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGC > 2:2711738/1‑91 CCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGC < 1:3855599/91‑1 CCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGC < 1:5716874/91‑1 CCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGC > 1:6447790/1‑91 CCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGC > 2:6311546/1‑91 CCTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGC < 2:1058356/91‑1 CTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCA < 2:2518114/91‑1 CTCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCA > 1:3478844/1‑91 TCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCAT < 1:1063944/91‑1 TCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCAT > 2:2801990/1‑91 TCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCAT < 2:6029225/91‑1 TCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCAT < 1:3193178/91‑1 TCTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCAT > 2:4890885/1‑91 CTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATT > 1:1082373/1‑91 CTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATT > 1:2661959/1‑91 CTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATT < 1:3208139/91‑1 CTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATT > 1:1046979/1‑91 CTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATT > 2:3440104/1‑91 CTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATT > 2:3440063/1‑91 CTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATT > 2:3439584/1‑91 CTTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATT > 2:2737552/1‑91 TTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTA < 1:4997400/91‑1 TTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTA > 1:2718427/1‑91 TTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTA > 2:3721718/1‑91 TTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTA > 1:651315/1‑91 TTTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTA > 1:2500810/1‑91 TTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGGGCAATGCGTGGGCATTAT < 1:2394971/91‑1 TTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTAT > 1:3265927/1‑91 TTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAAT < 2:5623689/78‑1 TTCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAAT > 1:5623689/1‑78 TCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTATT < 1:1383345/91‑1 TCTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTATT < 1:119137/91‑1 CTTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTATTC > 2:4230575/1‑91 AACGCCACAAATAATAACAAGGGGAATAATGCCCAAGCATTGCTCTTTTTATGTACTTCCATCCTTTTTACCTGCTTTCCAATTAAAAATACCTCTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2444786‑2444885‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctctttctTCATCGTTTGTGAGAAAGAGGTATTTTTAATTGGAAAGCAGGTAAAAAGGATGGAAGTACATAAAAAGAGCAATGCTTGGGCATTATTC < USA300TCH1516_ALE/2444897‑2444809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |