| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2143383 | 214 (0.600) | 11 (0.040) | 8/132 | NT | 5.8% | intergenic (+18/+7) | USA300HOU_RS10935/USA300HOU_RS10940 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2143399 | 183 (0.620) | coding (1245/1254 nt) | USA300HOU_RS10940 | hypothetical protein | |||||
TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2143280‑2143383‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaacgaatcacaGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAAG < USA300TCH1516_ALE/2143399‑2143310 TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAA < 1:383100/91‑1TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAA > 2:5474935/1‑91TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAA > 1:1783835/1‑91TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAA < 1:1806221/91‑1TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAA < 1:2379781/91‑1TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAA < 1:2459541/91‑1 CGTTATATTCCAATTACTTAATCCTGAAGAGTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAA < 2:2950122/91‑1 GTTATATTCCAATTACTTAATCCTGATGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAA < 2:4876349/91‑1 GTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAA > 1:6347449/1‑91 TTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAA < 1:4993844/91‑1 TTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAA > 1:4994455/1‑91 TTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAA < 1:1088830/91‑1 TTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAA < 1:517763/91‑1 TATATTCCAATTACTTAATCCTGAGGCTTTGCAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAA > 2:2545014/1‑91 TATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACG > 1:6265561/1‑91 TATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACG > 1:1560306/1‑91 TATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACG > 1:4401571/1‑91 TTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAA > 1:1604964/1‑91 TCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGATTTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAAT > 2:5964607/1‑91 TCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAAT > 1:1654882/1‑91 TCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAAT > 2:6449648/1‑91 CCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGACTTCTATATATCACATTTTTATTCCATAATAAAAAAAACGAATa > 1:4336998/1‑90 CCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATC > 1:6131342/1‑91 CAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCA > 1:4117880/1‑91 AATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACTAATCAC > 2:6412316/1‑91 AATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCAC > 1:1118125/1‑91 AATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCAC > 1:3117156/1‑91 AATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATACCAAAATAAAAAAAACGAATCAC < 2:3370882/91‑1 ATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACA > 1:263266/1‑91 GAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACAGCGACGATAATCC < 2:4623925/91‑1 CTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACAGCGACGATAATCCGTGT < 1:6071726/91‑1 TTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACAGCGACGATAATCCGTGTGT < 2:4082081/91‑1 TTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACAGCGACGATAATCCGTGTGT < 2:3024411/91‑1 TGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACAGCGACGATAATCCGTGTGTG < 1:4540965/91‑1 TGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACAGCGACGATAATCCGTGTGTG < 1:4540999/91‑1 GAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACAGCGACGATAATCCGTGTGTGA < 1:776103/91‑1 GAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACAGCGACGATAATCCGTGTGTGA < 1:652512/91‑1 AAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACAGCGACGATAATCCGTGTGTGAT < 1:849991/91‑1 AAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAATAAAAACGAATCACAGCGACGATAATCCGTGTGTGATTC < 1:2847534/91‑1 AGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAATAAAAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTT > 2:3568700/1‑91 AAAAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTG > 1:3906905/1‑91 AAAAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTG < 2:3734852/91‑1 AAAAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTG > 2:573870/1‑91 AAAAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTG > 1:3906689/1‑91 AAAACGAATCACGGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAAGAAAAATGTGATATATAAAATTCGCTTGTTCCGTGG < 1:6910307/91‑1 AAAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGG < 2:641722/91‑1 AAAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTATTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGG > 1:5454331/1‑91 AAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAGATGTGATATATAAAATTCGCTTGTTCCGTGGC < 2:6137560/91‑1 AAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGC < 1:1927942/91‑1 AAACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGC < 2:1419966/91‑1 AACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCT < 2:3460912/91‑1 AACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCT > 1:6515402/1‑91 AACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCT < 2:490095/91‑1 AACGAATAACAGCGACGATAATCCGTGTGTGATTCGTTCTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCT > 1:6723030/1‑91 ACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTT < 2:4649041/91‑1 ACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTT < 1:1423115/91‑1 ACGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTATATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTT > 2:4716462/1‑91 ACGAATCACAGCCACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTT < 2:4470699/91‑1 CGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGTAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTT > 2:1210980/1‑91 CGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTT < 2:1726052/91‑1 CGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTT < 2:2781776/91‑1 CGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTT < 2:4085989/91‑1 CGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTT < 2:3916234/91‑1 CGAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTT < 1:5482137/91‑1 GAATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTT < 2:1226744/91‑1 AATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTT < 2:4889988/91‑1 AATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTT < 1:4413072/91‑1 ATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAACATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTT > 1:5794522/1‑91 ATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTT > 2:3792454/1‑91 ATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTT < 1:5901072/91‑1 ATCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTT > 1:2705440/1‑91 TCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTC < 1:5684195/91‑1 TCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTC < 1:535604/91‑1 TCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTC > 1:2960585/1‑91 TCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTC < 2:6291909/91‑1 TCACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTC < 2:1751259/91‑1 CACAGCGACGATTATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCA < 2:4496799/91‑1 CACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCA < 2:3517276/91‑1 CACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCA < 1:933170/91‑1 CACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCA > 1:396697/1‑91 ACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAA > 2:1357852/1‑91 ACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAA < 2:6787345/91‑1 ACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAA < 2:6557353/91‑1 ACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAA > 1:3495405/1‑91 ACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAA > 2:4488998/1‑91 ACAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAA > 1:6150318/1‑91 CAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAA < 2:5200954/91‑1 CAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAA < 2:5200582/91‑1 CAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAA < 2:5703486/91‑1 CAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAA < 1:3042889/91‑1 CAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAA < 2:5200470/91‑1 CAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAA < 1:234095/91‑1 CAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAA < 1:4967292/91‑1 CAGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAA > 2:9766/1‑91 AGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAAG < 1:3286565/91‑1 AGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAAG < 2:4747613/91‑1 AGCGACGATAATCCGTGTGCGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAAG < 1:4319379/91‑1 TCGTTATATTCCAATTACTTAATCCTGAGGCTTTGAAAAAAGCCACGGAACAAGCGAATTTTATATATCACATTTTTATTCCATAATAAAAAAAACGAATCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2143280‑2143383‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaacgaatcacaGCGACGATAATCCGTGTGTGATTCGTTTTTTTTATTATGGAATAAAAATGTGATATATAAAATTCGCTTGTTCCGTGGCTTTTTTCAAAG < USA300TCH1516_ALE/2143399‑2143310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |