| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2001795 = | NA (NA) | 31 (0.100) | 14/140 | NT | NA | intergenic (‑18/+2366) | USA300TCH1516_01884/perR | tRNA‑Ile/Peroxide‑responsive repressor PerR |
| ? | USA300TCH1516_ALE | 2179784 = | NA (NA) | intergenic (+3546/+1749) | ilvA/USA300TCH1516_02069 | L‑threonine dehydratase biosynthetic IlvA/tRNA‑Gly | |||||
Only 100 of 265 total aligned reads displayed.
GAAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2001894‑2001795‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgaatgttAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTGA > USA300TCH1516_ALE/2179784‑2179873 GAAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTT > 2:6199373/1‑91GAAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTT < 2:2059013/91‑1GAAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTT < 2:6738428/91‑1 AAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTT < 2:3437846/91‑1 AAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTT < 2:1329133/91‑1 AAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTT > 1:5960013/1‑91 AAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTT > 1:2750238/1‑91 AAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTT > 1:2318756/1‑91 AGGTGCGGCTGGATCTCCCCCGTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTT < 2:2366061/91‑1 AGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTT > 1:1479333/1‑91 AGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTT > 2:4536615/1‑91 GGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTG > 1:473485/1‑91 GGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTG > 1:4275111/1‑91 GGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTG > 1:724865/1‑91 GTGCGGCTGGATCACCTCCTTTCTAAGGATCTATTCGGTGCATCTTCTTCAGAAGCTGCGGAATAACGTGACATATTGTATTCATTTTTGA > 2:2126360/1‑91 GTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGA < 2:6910554/91‑1 GTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGA < 1:728618/91‑1 GTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGA > 2:5944820/1‑91 TGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAA < 1:3770121/91‑1 GCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGTTGCGGAATAACGTGACATATTGTATTCAGTTTTGAAT < 2:4350730/91‑1 GCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAAT < 1:3242717/91‑1 GCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAAT > 1:130832/1‑91 GCGGCGGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAAT < 2:4837482/91‑1 CGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATG < 2:6298797/91‑1 CGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATG < 2:2279186/91‑1 CGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATG < 1:1516678/91‑1 GGCTGGATCACCTCCTTTGTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGT < 1:6882578/91‑1 GGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGT > 1:5876068/1‑91 GGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGT > 1:458324/1‑91 GGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGT < 2:2869484/91‑1 GCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT < 2:1470530/91‑1 GCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT > 2:3006367/1‑91 GCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT > 1:1025877/1‑91 GCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT > 1:555384/1‑91 GCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT > 1:4398184/1‑91 GCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT < 1:4239383/91‑1 GCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT > 1:6059466/1‑91 GCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT > 2:2267221/1‑91 GCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT > 1:3512315/1‑91 GATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAATGTGACATATTGTATTCAGTTTTGAATGTTAAAT < 2:2314797/91‑1 ATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAATGTGACATATTGTATTCAGTTTTGAATGTTAAATA < 2:2935261/91‑1 ATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTAAATA < 2:1725446/91‑1 ATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTAAATA < 2:4790010/91‑1 ATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTAAATA < 2:5820672/91‑1 TCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAATGTGACATATTGTATTCAGTTTTGAATGTTAAATAA < 2:2241882/91‑1 TCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTAAATAA < 2:4934273/91‑1 TCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTAAATAA < 2:1392534/91‑1 CACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAATGTGACATATTGTATTCAGTTTTGAATGTTAAATAAA < 1:393278/91‑1 CACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAATGTGACATATTGTATTCAGTTTTGAATGTTAAATAAA < 2:4087575/91‑1 CACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAATGTGACATATTGTATTCAGTTTTGAATGTTAAATAAA < 1:934029/91‑1 CACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAATGTGACATATTGTATTCAGTTTTGAATGTTAAATAAA < 2:1560453/91‑1 ACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAATGTGACATATTGTATTCAGTTTTGAATGTTAAATAAAC < 2:5153470/91‑1 CCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTAAATAAACATTC < 1:6274560/91‑1 TTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTG < 1:5661893/70‑1 TTGTATTCAGTTTTGAATGTTTATTTAACATTCAAAACTGAATACAATATGTCACGTTATTCCGCATCTTCTGAAGAAGATGTTCCGAATA > 2:204608/1‑91 TTTGAATGTTATATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA > 2:6949523/1‑91 TTTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA > 2:3595298/1‑91 TTTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA < 2:1203007/91‑1 TTTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA > 1:6472969/1‑91 TTTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA > 1:5442071/1‑91 TTTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA < 1:4196030/91‑1 TTTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA > 1:4037123/1‑91 TTTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA > 1:2660394/1‑91 TTTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA < 1:1717432/91‑1 TTTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAA > 1:1387847/1‑91 TTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAA > 1:852164/1‑91 TTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAA > 1:2197748/1‑91 TTGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAA > 1:1959752/1‑91 TGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAG > 2:6710369/1‑91 TGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAG > 2:4215787/1‑91 TGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAG > 2:3883961/1‑91 TGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAG > 2:827131/1‑91 TGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAG > 2:111194/1‑91 TGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAG > 1:11482/1‑91 TGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAG > 1:2731068/1‑91 TGAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAG < 1:2959488/91‑1 GAATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGG < 2:5694859/91‑1 AATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGA > 2:65799/1‑91 AATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGA > 1:3694696/1‑91 AATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGA < 1:6132019/91‑1 ATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAG < 2:5317876/91‑1 ATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAG > 1:2534742/1‑91 ATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAG < 2:5063646/91‑1 ATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAG < 2:2750354/91‑1 ATGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAG < 1:6816436/91‑1 TGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGG < 1:530405/91‑1 TGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGG < 1:2343604/91‑1 TGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGG < 1:6658838/91‑1 TGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGG < 2:5516981/91‑1 TGTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGG < 2:3198439/91‑1 GTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATGTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGT < 2:6463179/91‑1 GTTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGT < 2:5274938/91‑1 TTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTG < 1:3824544/91‑1 TTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTG < 2:467915/91‑1 TTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTG < 2:451656/91‑1 TTAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTG > 1:2234911/1‑91 TAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTGA < 1:5284680/91‑1 TAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTGA > 2:1008277/1‑91 TAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTGA < 2:2670376/91‑1 TAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTGA < 1:5829972/91‑1 GAAGGTGCGGCTGGATCACCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2001894‑2001795‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgaatgttAAATAAACATTCAAAACTGAATACAATATGTCACATTATTCCGCATCTTCTGAAGAAGATGTTCCGAATATATCCTTAGAAAGGAGGTGA > USA300TCH1516_ALE/2179784‑2179873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |