| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_vch_tpiA | 2,817,170 | C→A | E112* (GAA→TAA) | yqaB ← | fructose‑1‑P and 6‑phosphogluconate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_vch_tpiA | 2,817,170 | 0 | C | A | 100.0% | 60.7 / NA | 24 | E112* (GAA→TAA) | yqaB | fructose‑1‑P and 6‑phosphogluconate phosphatase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (12/12); total (12/12) | |||||||||||
TTGCACGCCCATACGCTGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGTTTTTTCACGCGCTAACGCATGCGGGTCGAGATCGG > NC_000913_3_vch_tpiA/2817030‑2817313 | ttGCACGCCCATACGCTGCGCGCACAACAAAAATGTGTCTAGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCg > 1:443402/1‑149 (MQ=255) gCCCATACGCTGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCTTTCCTa > 2:187022/1‑149 (MQ=255) cTGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTg < 2:259425/149‑1 (MQ=255) gcACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAACGACGACGGCGTCAAAATAATAGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGcgac > 1:223824/1‑149 (MQ=255) caacaaAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGACAGCGACGACAGCAACAAAATAATGACGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCAGATCCTACAGCCATTGGGCgacgac > 1:57500/1‑149 (MQ=255) caaAACTGGGTCTGTGGCGGGTTTATTGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCTCCAGCAATGCCTCAGCGATGTCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCAt < 1:557782/149‑1 (MQ=255) aaaaTGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGc > 2:20975/1‑149 (MQ=255) aaaaTGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCATTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGc > 2:21628/1‑149 (MQ=255) tccggCGCGGGTTTATTGTGTTTGACGTAATCGGCAACGACGACCGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCTTCTGCGATGGCGCTTTAATTCCTCGTTCCTACAGCCATTGGGCGACGACCATGCCAACtttt < 1:187022/146‑1 (MQ=255) ttATGGTGTTTGACGTGATCGGCAGCGACGATGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTATCTCCTTGTTCCTACATCCATTGGGCGACGACCATGCCAACTTTTCACCACATcaac < 1:336847/149‑1 (MQ=255) tATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGTTGCGCCAGCAATGCCTCAGCGATGGCTCTTTAACTCCCCTTTTCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATcaaca < 1:447269/149‑1 (MQ=255) tGGTGTTTGACGTGATCGACAGCAACGACGGCGTCAAAATAATGGCGTAATCCCAAGTGCGCCAGCAATGCCACAGCGCTGGCGCTTTAACTCCCCCTTCCTACAGCCATTAGGCGACGACCATACCAACTTTTCACCACATCAACAag > 1:534694/1‑149 (MQ=255) gttGAGGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGaa < 2:244682/148‑1 (MQ=255) gTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCTTTCCTACAGCTATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGtt < 1:197875/149‑1 (MQ=255) aGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTGTCACCACATCAACAAGAGGAAGCGGTCCGACGCTAt > 2:493095/1‑149 (MQ=255) ggcgacgGCGTCAAAAGAATGGGGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTATCTCCCCCTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCca < 2:129717/147‑1 (MQ=255) tCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATActt < 1:107790/133‑1 (MQ=255) tCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATActt > 2:107790/1‑133 (MQ=255) gTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCg > 1:286116/1‑101 (MQ=255) gTGCGCCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCg < 2:286116/101‑1 (MQ=255) gcgcCAGCAATGCCTCAGCGATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGTTTTTTCAcgc < 1:85202/149‑1 (MQ=255) tCAGCGATGGCGCTTTAACTCACCGTTCCTGCAGCCATTGGGCTACGACCATGCCAACTTTTCACCCAATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGTTTTTTCACCAGCCAGCGCATGCgg > 2:98162/1‑149 (MQ=255) cGATGGCTCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGTTTTTTCACGCGCTAACGCATGCGGGTCg < 2:215063/149‑1 (MQ=255) gcTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTATTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGGTTTTTCACGCGCTAACGCATGCGGGTCGAGATCgg > 1:187842/1‑149 (MQ=255) | TTGCACGCCCATACGCTGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGCGATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGTTTTTTCACGCGCTAACGCATGCGGGTCGAGATCGG > NC_000913_3_vch_tpiA/2817030‑2817313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |