New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1158504 =	56 (0.970)	18 (0.350) +CAGATTGGTGAATA	17/250	2.8	29.0%	coding (636/1434 nt)	ptsG	fused glucose‑specific PTS enzymes: IIB component/IIC component
	?	NC_000913	= 1158538	42 (0.730)					coding (670/1434 nt)	ptsG	fused glucose‑specific PTS enzymes: IIB component/IIC component

CAGACCGTACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1158651‑1158504 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCTGGATTGCAGAACC  <  NC_000913/1158538‑1158394                                                                                                                                                     ||||||||||||||                                                                                                                                                  CAGACCGTACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGC                                                                                                                                                                <  1:1011256/149‑1     ccttcCATTTTGACCAGGAAGCCACCAGACAGTTTCCCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCTTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGCAGAT                                                                                                                                                            <  1:474282/144‑1     CCGTACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGCAGAT                                                                                                                                                            >  2:885621/1‑149         ACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATCACGCGGCATATCACCGTGCAAAACCTGACCGGCTGCTTTGGTGGATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGCAGATTGGT                                                                                                                                                        <  1:961071/149‑1              TTGAACAGGAAGCCACCAGACAGTTTCCCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGCAGATTGGTGAATA                                                                                                                                                   <  1:906809/149‑1                GAACAGGAAGTCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACA                                                                                                                                                 <  2:647703/149‑1                                  CAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAA                                                                                                                               <  1:885621/149‑1                                                    GTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATTTGGAAAGGTACGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGG                                                                                                             <  1:117485/149‑1                                                       ACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGC                                                                                                          <  1:889341/149‑1                                                          CGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTTGTGTATTCACCAATCTGCATCTGGAAAGGTAAGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGA                                                                                                       <  2:777310/149‑1                                                            acagATAAGGGGGGATGTCGCCGTGGAAAACCTGGCCTGCGGCGTTGGTGTATTCCTCAATCTGCATCTGGAAAGGCACGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACC                                                                                                     <  2:530215/145‑1                                                                             TCGGCGTGGAAAGCCTGCCCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAAC                                                                                    <  1:100229/149‑1                                                                                   TGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGA                                                                              <  2:74431/149‑1                                                                                                 TGCTGTGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATG                                                                <  1:630253/149‑1                                                                                                                            caaCTGGAAAGGGACGTTCAAAATGCAGATTGGTAAAAAAACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAA                                     <  2:134198/146‑1                                                                                                                             ATCGGGAAAGGGACGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAG                                    <  2:77246/149‑1                                                                                                                                        TACGTGCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGA                         <  2:911409/149‑1                                                                                                                                         ACGTTCCAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAG                        <  1:554451/149‑1                                                                                                                                               CAGATGCAGATTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGAT                                                                             <  2:270499/90‑1                                                                                                                                               CAGATGCAGATTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGAT                                                                             >  1:270499/1‑90                                                                                                                                               CAGATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGG                  >  1:666648/1‑149                                                                                                                                                 GATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTC                >  1:1012698/1‑149                                                                                                                                                  ATGCAGATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCT               >  2:700603/1‑149                                                                                                                                                        ATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTAC                                                  >  1:882769/1‑108                                                                                                                                                        ATTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTAC                                                  <  2:882769/108‑1                                                                                                                                                         TTGGTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTG                                                                                                           <  2:702644/50‑1                                                                                                                                                            GTGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCTGGATTGCAGA     >  1:325527/1‑149                                                                                                                                                             TGAATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGAAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCTGGATTGCAGAA    >  2:81251/1‑149                                                                                                                                                               AATACACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCTGGATTGCAGAACC  >  1:927991/1‑149                                                                                                                                                     ||||||||||||||                                                                                                                                                  CAGACCGTACATTTTGAACAGGAAGCCACCAGACAGTTTACCCGCAGTCGGGTCACCCGCCATATAACGCGGAATGTCGCCGTGGAAAACCTGACCTGCTGCGTTGGTGTATTCACCAATCTGCATCTGGAAAGGTACGTTCCAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1158651‑1158504 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCAATCTGCATCTGGAAAGGTACGTTCCAGATGTGGTGCAGACCAAACGGTACCAGGCAACGTTCGATGAAACCGTAAATGCCAAACGCAACTACCGGGTTCTGGTAAGCAGCCCACTGAGAGAAGGTCTGGATTGCAGAACC  <  NC_000913/1158538‑1158394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.