Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,397,381 Δ13,756 bp [ynaJ][ttcA] 15 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1397381 1411136 13756 107 [0] [0] 107 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,ydaM,ydaN,fnrS,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13973800 (0.000)107 (1.020) 79/292 0.2 100% coding (16/258 nt) ynaJ DUF2534 family putative inner membrane protein
?NC_000913 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA s(2)C32 thioltransferase, iron sulfur cluster protein

Only 100 of 107 total aligned reads displayed.

CTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1397234‑1397380
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCAATCACC  >  NC_000913/1411137‑1411283
                                                                                                                                                                                                                                                                                                      
CTTCCCTAACTTATCAATGCGTTGATTGTAAATCCAGCTACGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTTGGTATCAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACAC                                                                                                                                                   <  1:1643144/149‑1
CTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACAC                                                                                                                                                   >  2:1725707/1‑149
CTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACAC                                                                                                                                                   >  2:392851/1‑149
  TCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTT                                                                                                                                                 <  1:486269/149‑1
    CCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCA                                                                                                                                               >  1:177227/1‑149
    CCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCA                                                                                                                                               <  1:1672224/149‑1
    CCTAACTAATCAATGCCTTGATTGTAAATCCACCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCA                                                                                                                                               <  1:824992/149‑1
     CTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAG                                                                                                                                              >  1:1267166/1‑149
     CTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAG                                                                                                                                              >  1:1600937/1‑149
     CTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAG                                                                                                                                              >  1:1438243/1‑149
       AACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAA                                                                                                                                            >  2:1468211/1‑149
            ATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTG                                                                                                                                       >  2:669724/1‑149
            ATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGAGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTG                                                                                                                                       <  2:1118681/149‑1
             tgAATGCGTTGATTTTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGATTTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGG                                                                                                                                      <  1:119255/147‑1
             TCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGG                                                                                                                                      <  1:669724/149‑1
              CAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGG                                                                                                                                     <  1:1020039/149‑1
              CAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGG                                                                                                                                     <  1:654178/149‑1
               AATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGT                                                                                                                                    >  2:33297/1‑149
                ATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTG                                                                                                                                   >  1:649411/1‑149
                  GCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGAT                                                                                                                                 <  2:263275/149‑1
                  GCGTTGATTGTAAATCCAGCTAAGAGGAGAGGTTTTCAGAGCAGACACCGGTGAAATGTCAAGGTATTGATACGTTTAGCTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATAATGCCGAAACACGTCAGACCCGAGGGTGAT                                                                                                                                 >  2:1000789/1‑149
                    GTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGC                                                                                                                               >  1:1213555/1‑149
                        ATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTT                                                                                                                           <  1:1468211/149‑1
                        ATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTT                                                                                                                           <  2:679257/149‑1
                          TGTAAATCCAGCTAATAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGCTATTGTTACTTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACCCATCAGAACCGTGGGTGATGCCTTTGA                                                                                                                         >  2:946470/1‑149
                           GTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAA                                                                                                                        >  1:147583/1‑149
                           GTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAA                                                                                                                        <  1:630277/149‑1
                             AAATCCAGCTAAGAGGTGAGGTGTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAAT                                                                                                                      <  1:1128922/149‑1
                              AATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATC                                                                                                                     <  2:649411/149‑1
                                 CCAGCTAAGAGGTGAGGTTTTCATAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAA                                                                                                                  <  1:28665/149‑1
                                  CAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAC                                                                                                                 <  1:73530/149‑1
                                  CAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAC                                                                                                                 <  1:926675/149‑1
                                   AGCTAAGATGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACA                                                                                                                <  1:1725707/149‑1
                                   AGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACA                                                                                                                <  1:392851/149‑1
                                      TAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGT                                                                                                             >  2:670918/1‑149
                                       AAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCATAAACGTGGGTGATGCCTTTGAAATCGAACAGTTT                                                                                                            >  1:1250180/1‑149
                                          AGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGT                                                                                                         >  1:360889/1‑149
                                          AGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGT                                                                                                         >  2:1742896/1‑149
                                             TGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATC                                                                                                      >  2:1687096/1‑149
                                              GAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCG                                                                                                     <  1:1647654/149‑1
                                               AGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGC                                                                                                    >  2:114544/1‑149
                                                tGTTTTCAGAGCAGACAACGGTTAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAATTCGAACAGGTTGGTATCGCA                                                                                                   <  2:1692186/148‑1
                                                     TCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAT                                                                                              <  1:119180/149‑1
                                                     TCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAT                                                                                              <  1:428462/149‑1
                                                         AGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGA                                                                                          <  1:33297/149‑1
                                                         AGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGGTGGTATCGCACAGATGCGA                                                                                          <  2:579540/149‑1
                                                          GCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAC                                                                                         >  2:1598310/1‑149
                                                           CAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGCATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCAGAGATGCGACG                                                                                        >  1:1477586/1‑149
                                                           CAGACAACGGTGAAATGGCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACG                                                                                        <  1:1152190/149‑1
                                                            AGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGG                                                                                       <  1:1671575/149‑1
                                                                AACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACC                                                                                   <  2:777374/149‑1
                                                                AACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACC                                                                                   >  2:1573666/1‑149
                                                                AACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACC                                                                                   >  2:280049/1‑149
                                                                       AAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCT                                                                            >  2:1325499/1‑149
                                                                         ATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGC                                                                          <  1:1598310/149‑1
                                                                            TCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATC                                                                       <  1:1567013/149‑1
                                                                              ATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGC                                                                     >  2:390549/1‑149
                                                                              ATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGC                                                                     >  2:931023/1‑149
                                                                                    TTGTTACGTTTAGGTAACAAGAAATTTGTATGCACAAGGATTACATCATGATTATGGAGAAAAACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCTACGGCACCAAATTCTGCATCGCCCTGAA                                                               >  2:801430/1‑149
                                                                                       TTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAT                                                            >  1:1021495/1‑149
                                                                                        TACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATC                                                           <  1:1115461/149‑1
                                                                                         ACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACATCTGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCG                                                          >  1:1625369/1‑149
                                                                                           gtgTAGGTAACAAGAAATTTGGCTCCACAACGAAGACCTCCTGTTTATGGCGAAACACTTCAGAACCGGGGGTGATGCCTTTGAACTCGACCAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTC                                                        <  2:806250/146‑1
                                                                                              TAGGTAACAAGAAATTTGTCTGCACACGGATTACCTCATGATTATGGCGCAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCG                                                     <  1:704789/149‑1
                                                                                                  TAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATAC                                                 >  2:1546376/1‑149
                                                                                                  TAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATAC                                                 >  1:1411079/1‑149
                                                                                                     CAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACAGTGGGTGATTCCTTTGAAATCGAACAGGTTGGAATCGCACAGAAGCGACGGCACCACAATCTCCATCGCGCTGAACATCGTATCGATACGCC                                              >  1:269280/1‑149
                                                                                                      AAGAAATTTGTCTGCACAAGGATTACATCATGATTATGTCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATAGCGCTGAACATCGTCTCGATACGCCC                                             >  2:1509966/1‑149
                                                                                                      AAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACTGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGCACATCGTCTCGATACGCCC                                             >  1:1490343/1‑149
                                                                                                      AAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCC                                             >  2:756287/1‑149
                                                                                                      AAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCC                                             >  2:727044/1‑149
                                                                                                       AGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCT                                            <  2:360889/149‑1
                                                                                                                     ACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTTGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGATGGAACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATC                              >  2:1409526/1‑149
                                                                                                                     ACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACAACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATC                              >  2:256032/1‑149
                                                                                                                     ACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGGTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATC                              <  2:1213555/149‑1
                                                                                                                      CAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCC                             >  2:498710/1‑149
                                                                                                                       AAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGTTATCTCACAGATGAGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTAGATACTCCCTGGATAACTTTTATCCC                            >  1:336544/1‑149
                                                                                                                        AGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCA                           <  2:1267166/149‑1
                                                                                                                        AGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCA                           <  1:1325499/149‑1
                                                                                                                        AGGATTACATCATGATTATGGCGAAACACTTCAGAACCGGGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCTCAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCA                           <  2:1021495/149‑1
                                                                                                                           ATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTC                        >  1:146441/1‑149
                                                                                                                            TTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAAAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCA                       >  1:792198/1‑149
                                                                                                                             TACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAGCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCAC                      <  1:1742896/149‑1
                                                                                                                             TACATAATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCAC                      <  2:51627/149‑1
                                                                                                                               CATCTTGATTTTGGCGAAACACTTCAGAACGGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGAACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGC                    <  1:946470/149‑1
                                                                                                                                ATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCA                   >  1:236491/1‑149
                                                                                                                                 TCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAA                  <  1:1579846/149‑1
                                                                                                                                  ccTGATTATGGCGAAAAACTTCACAACCGTGGGGGATGCCTTTGAAATGGAACAGGTTGGTTGCGCACAGATGCGACGGCACGACATTGTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAAC                 <  2:1477586/147‑1
                                                                                                                                  CATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAAC                 >  1:1694350/1‑149
                                                                                                                                   ATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACA                >  1:1326009/1‑149
                                                                                                                                    TGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACAT               <  2:177227/149‑1
                                                                                                                                     GATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATG              >  2:1477998/1‑149
                                                                                                                                      ATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGT             <  1:931023/149‑1
                                                                                                                                      ATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGT             <  1:390549/149‑1
                                                                                                                                        TATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCA           <  2:1442907/149‑1
                                                                                                                                           GGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCA        >  2:266628/1‑149
                                                                                                                                           GGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATACGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGGTTATCCCAGTCACGCAACATGTCAGCA        >  1:1023886/1‑149
                                                                                                                                              GAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACCTCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCAATC     >  2:1035461/1‑149
                                                                                                                                                AACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCAATCAC   <  1:492862/149‑1
                                                                                                                                                 ACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCAATCACC  >  2:1508996/1‑149
                                                                                                                                                                                                                                                                                                      
CTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1397234‑1397380
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCAATCACC  >  NC_000913/1411137‑1411283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.