New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_pae_pgi | 2084191 = | 222 (2.660) | 26 (0.340) | 19/234 | 5.1 | 10.9% | intergenic (+8/+35) | sbcB/yeeD | exodeoxyribonuclease I; exonuclease I/putative TusA family sulfurtransferase |
? | NC_000913_3_pae_pgi | 2084215 = | 217 (2.800) | intergenic (+32/+11) | sbcB/yeeD | exodeoxyribonuclease I; exonuclease I/putative TusA family sulfurtransferase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
AGTTTGATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_pae_pgi/2084347‑2084191 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggaggACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATC > NC_000913_3_pae_pgi/2084215‑2084363 AGTTTGATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCG < 2:795094/150‑1 TTTGATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGC > 2:556282/1‑150 TTTGATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGC > 1:308300/1‑150 TGATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGG < 3:320492/150‑1 GATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGA < 3:335818/150‑1 TTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGG > 2:367700/1‑150 GCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGA > 2:838002/1‑138 GCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGA < 1:838002/138‑1 AACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGA > 2:80158/1‑136 AACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGA < 1:80158/136‑1 AAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCG > 2:117582/1‑126 AAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCG < 1:117582/126‑1 CAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAG > 4:505485/1‑129 CAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAG < 3:505485/129‑1 CAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGA < 1:182263/128‑1 CAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGA > 2:182263/1‑128 CATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGGCCAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATC < 1:80482/150‑1 CATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGGCCAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATC > 2:80482/1‑150 GATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGG > 4:260419/1‑68 GATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGG < 3:260419/68‑1 TCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGC < 1:734755/50‑1 TCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGC > 2:734755/1‑50 AAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTG > 1:742176/1‑87 AAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTG < 2:742176/87‑1 CAACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTT < 2:553063/142‑1 CAACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTT > 1:553063/1‑142 AACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCAGGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCT > 1:630322/1‑150 AACATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACCGTGGGATTGCTTCAGTTGCCT > 1:631283/1‑150 CATTGTCCTCCGCCGTACCAGCGGCGGAGGCCAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGA < 2:710118/133‑1 CATTGTCCTCCGCCGTACCAGCGGCGGAGGCCAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGA > 1:710118/1‑133 CATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCT > 2:528671/1‑88 CATTGTCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCT < 1:528671/88‑1 TCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCA > 2:419110/1‑150 TCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACT < 1:163783/122‑1 TCCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACT > 2:163783/1‑122 CCTCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAA > 1:117476/1‑150 TCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGCTGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAAgc > 1:774671/1‑148 TCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATC > 2:54935/1‑150 TCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATT < 1:491973/127‑1 TCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATT > 2:491973/1‑127 TCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTG < 4:59845/91‑1 TCCGCCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTG > 3:59845/1‑91 CCGTACCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAAC > 2:54496/1‑150 CCAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAAT < 2:117476/150‑1 CAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATC < 2:631283/150‑1 CAGCGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATC < 2:630322/150‑1 CGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACT < 4:500163/150‑1 GCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATC > 2:765385/1‑135 GCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATC < 1:765385/135‑1 CGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAAC > 2:832547/1‑150 GACAATGTTGAGTCAGGCTTTTTTTTTTTTTATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATC > 2:863559/1‑150 GACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATC > 4:184835/1‑150 GACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAAT < 2:141972/138‑1 GACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAAT > 1:141972/1‑138 GACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGT > 2:516118/1‑123 GACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGT < 1:516118/123‑1 GACAATGTGGAGTCAGGCTTTTGGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGTTGCAATCAAACTCAATCACTAACTCATC > 2:70030/1‑150 AGTTTGATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGACTCAACATTGTCCTCCGCCGTACCAGCGGCGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_pae_pgi/2084347‑2084191 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggaggACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATC > NC_000913_3_pae_pgi/2084215‑2084363 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |