| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 3,106,112 | G→T | P133P (CCG→CCT) | nupG → | nucleoside transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 3,106,112 | 0 | G | T | 92.0% | 415.9 / 21.9 | 138 | P133P (CCG→CCT) | nupG | nucleoside transporter |
| Reads supporting (aligned to +/- strand): ref base G (5/6); new base T (69/57); total (75/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
ATGGCGGCACAGGTCACGACACCGGAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATAT > NC_000913_3_pae_pgi/3105966‑3106258 | aTGGCGGCACAGGTCACGACACCGGAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCACTCCa > 4:859858/1‑150 (MQ=255) ggcggcACAGGTCACGACACCGGAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAAt > 2:1295922/1‑150 (MQ=255) gcggcACAGGTCACGACACCGGAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATc > 2:1302394/1‑150 (MQ=255) acaGGTCACGACACCGGAAGCGTTGTTCCTTGTGGTAGTAATTAACTCGCTTGCTTAGATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATGTCGTTACTGACTTCCCTCCAATCCGTAt < 1:1178347/150‑1 (MQ=255) acCGGAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCAt > 1:572327/1‑150 (MQ=255) cGGAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCg > 2:547912/1‑150 (MQ=255) ggAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCgg > 4:834210/1‑150 (MQ=255) gAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGc > 3:18891/1‑150 (MQ=255) aGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCtt < 3:548732/150‑1 (MQ=255) cGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTa < 1:1255051/150‑1 (MQ=255) aTGTTCCTTGTGATATTGATTCACTCGTTTGCTTCTATGCCACCTCTTGCGCATTTTCATTTTATTTTTTTATATTGACCGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATc < 1:1009441/150‑1 (MQ=255) tGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCa > 1:149997/1‑150 (MQ=255) tgATATTGATTGTCTCGTTTGTTTATATGTCAGCGCTTGGGTTATTCAACCCTATCTCTTACTATCTCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAAtgt < 1:822136/150‑1 (MQ=255) gATAATGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCaa < 4:848678/146‑1 (MQ=255) atgttGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGAACTgtgg < 2:491627/147‑1 (MQ=255) atatTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTggg < 1:1149166/121‑1 (MQ=255) atatTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTggg > 2:1149166/1‑121 (MQ=255) atatTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgg < 1:120563/150‑1 (MQ=255) tGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgggtgg < 4:701872/150‑1 (MQ=255) ttAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGa < 3:629665/150‑1 (MQ=255) tAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAg > 1:344176/1‑150 (MQ=255) aaCTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGc < 4:711247/150‑1 (MQ=255) gTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTc > 3:475436/1‑150 (MQ=255) gCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGc < 2:1150677/150‑1 (MQ=255) cTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCtt > 1:1593304/1‑115 (MQ=255) cTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCtt < 2:1593304/115‑1 (MQ=255) ttATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCtt > 1:1526876/1‑150 (MQ=255) tcatatGCCAACGCTTGGGTTAATCAACACCACCTCTTACTAGCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCAGGGCANTGTGGGTGGTGAGCCTGTCTGGCtt < 1:1030166/148‑1 (MQ=255) atGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgg > 1:745020/1‑126 (MQ=255) atGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgg < 2:745020/126‑1 (MQ=255) atGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGaa < 4:723288/150‑1 (MQ=255) gCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAAtt > 2:1639664/1‑150 (MQ=255) cgaaCGCTTGGGTTAATCAACACCATCTTTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCACAAATACGTATCAGGGGCACCATCGGCTTTATCATGGCTATGTGGGGGGTGAGCCTGTTTGGGTTCGAATTa > 1:1190096/3‑150 (MQ=255) ccAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATAGGATTTATCATGGCAATGTGGGTGGTGAGCCAGTCTGGCTTTGAATTa > 4:263377/1‑150 (MQ=255) cAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCAt > 1:664565/1‑112 (MQ=255) cAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTaa < 3:363501/150‑1 (MQ=255) cAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTaa < 4:749925/150‑1 (MQ=255) aaCGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAg > 2:579160/1‑150 (MQ=255) aaCGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTAAGGACTTCCCTGCGATCCATAGCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAg > 1:589086/1‑150 (MQ=255) aCGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGc < 2:1637119/150‑1 (MQ=255) gCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCAc < 4:131185/93‑1 (MQ=255) gTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgggt > 2:997792/1‑114 (MQ=255) gTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgggt < 1:997792/114‑1 (MQ=255) gTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTaa > 1:852769/1‑140 (MQ=255) gTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTaa < 2:852769/140‑1 (MQ=255) gTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACAGACTTCCCTCCAATCCGTATCTggg < 4:1026057/83‑1 (MQ=255) gTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACAGACTTCCCTCCAATCCGTATCTggg > 3:1026057/1‑83 (MQ=255) aaTCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCt < 4:909611/150‑1 (MQ=255) aTCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTg > 3:758053/1‑150 (MQ=255) tCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTgg > 2:724697/1‑77 (MQ=255) tCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTgg < 1:724697/77‑1 (MQ=255) tCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTTGGGAACCAACGGATCCATCACTGTAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGt > 1:68229/1‑150 (MQ=255) tCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGt > 3:691691/1‑150 (MQ=255) tCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGt > 3:884114/1‑150 (MQ=255) aaCACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCt < 2:1469015/120‑1 (MQ=255) aaCACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCt > 1:1469015/1‑120 (MQ=255) acacCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgg < 3:148084/104‑1 (MQ=255) acacCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgg > 4:148084/1‑104 (MQ=255) acacCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGc > 3:961637/1‑141 (MQ=255) acacCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGtata < 3:834210/150‑1 (MQ=255) cacCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTatat > 1:1609710/1‑150 (MQ=255) cacCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGc > 3:257660/1‑121 (MQ=255) cacCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGc < 4:257660/121‑1 (MQ=255) cacCAACTCTTACGATCGCCTGCAAAATGCTGGCATGGATATCGTTACTGACTTCCCTCCACTCCGTATCTGTGGCACCATCGGCTTTATTATCGCAATGTGGATGGTGAGCCTGTCTGGCTTCGAATTAATTTACATGCAGCTGTatat < 2:1190096/150‑1 (MQ=255) cATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTgg > 2:391357/1‑150 (MQ=255) cATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTgg > 2:391649/1‑150 (MQ=255) ctctTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTaa > 4:716447/1‑125 (MQ=255) ctctTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTaa < 3:716447/125‑1 (MQ=255) ctctTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGgcgc < 2:344176/150‑1 (MQ=255) tATCGCCTGCAAAATTCCGGGATGGATATCGTTACTGACTTCCCTCCAATACGTATCAGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGACTTCGAATTAAGCCACATGTAGCTGTATATCGGCGCAGCACtt > 2:1453392/1‑150 (MQ=255) aTCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACttt < 1:770017/150‑1 (MQ=255) ccTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGc > 4:353608/1‑150 (MQ=255) ccTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGc > 3:469748/1‑150 (MQ=255) ccTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATATGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGc > 2:1030202/1‑150 (MQ=255) tGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCa > 2:288577/1‑150 (MQ=255) tGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCa > 4:141123/1‑150 (MQ=255) tGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATATGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCa > 1:1489373/1‑150 (MQ=255) gCAAAATGCCGGGATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCAt > 3:819148/1‑150 (MQ=255) aaTGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTg < 1:986083/150‑1 (MQ=255) gggATGGATATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTg < 2:1609710/150‑1 (MQ=255) ggatggatATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGt < 1:288577/150‑1 (MQ=255) gatggatATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGtt < 1:936684/150‑1 (MQ=255) gatggatATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGGGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGtt < 2:1303251/150‑1 (MQ=255) ttggatATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGttt < 3:335537/149‑1 (MQ=255) ggatATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTAc < 1:579160/150‑1 (MQ=255) gatATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTaa > 2:1679482/1‑94 (MQ=255) gatATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTaa < 1:1679482/94‑1 (MQ=255) gatATCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTAcc < 1:1693776/150‑1 (MQ=255) tatCGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGtt < 2:117751/139‑1 (MQ=255) cGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgg < 2:1399071/61‑1 (MQ=255) cGTTACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATgtgg > 1:1399071/1‑61 (MQ=255) ttACTGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGActc > 4:952929/1‑150 (MQ=255) tGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTg > 3:1052345/1‑104 (MQ=255) tGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGcc > 1:343632/1‑150 (MQ=255) tGACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGcc < 4:475436/150‑1 (MQ=255) gACTTCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCg > 2:493298/1‑150 (MQ=255) ttCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCt < 3:721139/92‑1 (MQ=255) ttCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCat > 4:55102/1‑150 (MQ=255) ttCCCTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCat > 2:574232/1‑150 (MQ=255) cccTCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCatat > 2:445165/1‑150 (MQ=255) | ATGGCGGCACAGGTCACGACACCGGAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATAT > NC_000913_3_pae_pgi/3105966‑3106258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |