| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 1,623,718 | C→A | D45Y (GAT→TAT) | dgcZ ← | diguanylate cyclase, zinc‑sensing |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 1,623,718 | 0 | C | A | 95.5% | 476.3 / 10.3 | 134 | D45Y (GAT→TAT) | dgcZ | diguanylate cyclase, zinc‑sensing |
| Reads supporting (aligned to +/- strand): ref base C (3/3); new base A (62/66); total (65/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
CCAGCATTAATTCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGTCTTCTTGATCATTGCCACTCCTTTT > NC_000913_3_pae_pgi/1623577‑1623863 | cAGCATTAATTCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTc > 4:937986/1‑150 (MQ=255) aGCATTAATTCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCt < 2:93749/150‑1 (MQ=255) cATTAATTCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTgg < 3:1053841/150‑1 (MQ=255) cATTAATTCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTgg < 4:136253/150‑1 (MQ=255) cATTAATTCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTgg < 2:745702/150‑1 (MQ=255) aTTAATTCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGc < 2:447605/150‑1 (MQ=255) tAATTCCCGACCACAGTTATGCATATGTTGATGGGCGGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCtt > 1:1020504/1‑150 (MQ=255) ttCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACt < 3:762998/150‑1 (MQ=255) tCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTg > 1:1367101/1‑150 (MQ=255) aCCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATCCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCAtt > 3:863290/1‑149 (MQ=255) aGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTcg < 3:408658/150‑1 (MQ=255) gTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTcgc < 1:1072908/150‑1 (MQ=255) gTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTcgc < 1:868877/150‑1 (MQ=255) ttATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTcgcg < 2:496159/150‑1 (MQ=255) aTGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGAc < 1:1026226/150‑1 (MQ=255) atatGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACg > 3:683544/1‑150 (MQ=255) atGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAGCTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCt < 4:583203/150‑1 (MQ=255) tGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtg < 4:354458/150‑1 (MQ=255) gTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt > 4:846145/1‑150 (MQ=255) ttGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgtg > 2:1026395/1‑150 (MQ=255) tGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGc < 3:552312/128‑1 (MQ=255) tGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGc > 4:552312/1‑128 (MQ=255) tGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGa < 1:965281/150‑1 (MQ=255) gATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGaa < 1:754371/150‑1 (MQ=255) aTGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGaa < 4:389527/149‑1 (MQ=255) aTGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGaa > 3:389527/1‑149 (MQ=255) gCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATa > 2:1506395/1‑150 (MQ=255) gCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATa < 1:1633742/150‑1 (MQ=255) gCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATa > 1:331424/1‑150 (MQ=255) cAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATAc > 1:1054309/1‑150 (MQ=255) cAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATAc > 1:1054153/1‑150 (MQ=255) cAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATAc < 4:17452/150‑1 (MQ=255) ccATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCa < 3:752661/150‑1 (MQ=255) cATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAg > 3:259930/1‑150 (MQ=255) cATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAg > 2:554243/1‑150 (MQ=255) aTTAGCCGAACATAAGGTAATTCATTGTTATTGAGTAGCCTCAGATGATCATTTCACCGACCAAATTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTTGCGACCACGCTGTGAAACATACTCACCatc > 2:1120575/1‑148 (MQ=255) gCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACt > 4:354929/1‑150 (MQ=255) gCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACt < 3:278473/150‑1 (MQ=255) ccGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTg < 2:929315/150‑1 (MQ=255) ccGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGAcc < 2:800349/121‑1 (MQ=255) ccGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGAcc > 1:800349/1‑121 (MQ=255) cGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTgg > 1:328950/1‑150 (MQ=255) gAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGt > 4:17142/1‑150 (MQ=255) aaGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt < 2:993722/120‑1 (MQ=255) aaGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGACACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt > 1:993722/1‑120 (MQ=255) aGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGc < 2:1367101/150‑1 (MQ=255) ggTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACt > 1:157515/1‑95 (MQ=255) ggTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACt < 2:157515/95‑1 (MQ=255) gTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCAt > 1:457605/1‑150 (MQ=255) gTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCAt < 4:683544/150‑1 (MQ=255) gTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCAt > 2:313440/1‑150 (MQ=255) gTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCAt > 3:560785/1‑150 (MQ=255) aaTTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCg < 3:447010/150‑1 (MQ=255) aTTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGa < 2:1178352/150‑1 (MQ=255) tacATCGTTATCGAGTGGCCCCAGATGATCCATCCACCGACCCAACTGGCACAGTCCATAAGAATGGTTCTACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAt < 2:839093/148‑1 (MQ=255) tCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATa > 4:615658/1‑150 (MQ=255) aTCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGc > 2:942846/1‑150 (MQ=255) aTCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGc > 1:566261/1‑150 (MQ=255) gTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCtt > 3:201155/1‑150 (MQ=255) ttATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACg < 2:75283/67‑1 (MQ=255) tGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACAt > 4:289127/1‑105 (MQ=255) tGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAtt < 1:658189/150‑1 (MQ=255) gCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTa > 1:56337/1‑150 (MQ=255) ccccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATATGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTAGGCATCGATAGCCTTATTGAGATTTaa > 1:392823/1‑150 (MQ=255) cAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACaa > 4:302376/1‑150 (MQ=255) gatgatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGa < 2:1020504/150‑1 (MQ=255) atgatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGAt > 4:829233/1‑150 (MQ=255) atgatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGAt < 2:1566860/150‑1 (MQ=255) tgttCAAGCCACCGACCATACTGGAACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGAATCGCTCGCGACCACGCTGTGAAACATACTCACAAGCGACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTGACAAGATg < 4:713657/147‑1 (MQ=255) aTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCt < 3:296617/51‑1 (MQ=255) aTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCt > 4:296617/1‑51 (MQ=255) aTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGCGATTTAACAAGATGGCATCa > 4:1054868/1‑150 (MQ=255) aTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCa > 1:964723/1‑150 (MQ=255) aCCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTga > 3:46077/1‑126 (MQ=255) aCCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTga < 4:46077/126‑1 (MQ=255) aCCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAAttt < 4:682295/150‑1 (MQ=255) aCCGACCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAAttt > 2:701714/1‑150 (MQ=255) cGACCAAGCTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTcc < 2:1266133/150‑1 (MQ=255) aCCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATgg > 2:425671/1‑137 (MQ=255) aCCAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGt > 3:294645/1‑150 (MQ=255) tcAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGtt < 4:1034660/149‑1 (MQ=255) ccAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGtt < 1:550910/150‑1 (MQ=255) ccAAACTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGtt > 1:620811/1‑150 (MQ=255) aaaCTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGt > 1:1664393/1‑150 (MQ=255) aaCTGGCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGtc < 2:510448/150‑1 (MQ=255) ggCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGtcttct < 1:1418873/150‑1 (MQ=255) ggCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGtcttct > 2:77691/1‑150 (MQ=255) ggCACAGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGtcttct < 1:1005443/150‑1 (MQ=255) cacaGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGTCTTCTTg < 2:331424/150‑1 (MQ=255) acaGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAg > 1:779463/1‑89 (MQ=255) acaGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAg < 2:779463/89‑1 (MQ=255) caGTCCATAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGTCTTCTTGAt < 2:635511/150‑1 (MQ=255) aTAAGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAAc > 1:941413/1‑112 (MQ=255) aaGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGTCTTCTTGATCATTGCCa < 2:52810/150‑1 (MQ=255) aGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTga > 3:947351/1‑101 (MQ=255) aGAATGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTga < 4:947351/101‑1 (MQ=255) aTGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGTCTTCTTGATCATTGCCACTcc < 2:432965/150‑1 (MQ=255) aTGGTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGTCTTCTTGATCATTGCCACTcc > 1:432965/1‑150 (MQ=255) gTTATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGTCTTCTTGATCATTGCCACTCCttt < 2:278125/150‑1 (MQ=255) ttATACGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGTCTTCTTGATCATTGCCACTCCtttt < 1:1468882/150‑1 (MQ=255) | CCAGCATTAATTCCCGACCACAGTTATGCATATGTTGATGGGCAGAATCCATTAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAACAAGATGGCATCAATTTCCGTTGTCTTCTTGATCATTGCCACTCCTTTT > NC_000913_3_pae_pgi/1623577‑1623863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |