| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 3,316,818 | C→G | A237P (GCG→CCG) | nusA ← | transcription termination/antitermination L factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 3,316,818 | 0 | C | G | 99.2% | 448.6 / ‑3.7 | 128 | A237P (GCG→CCG) | nusA | transcription termination/antitermination L factor |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (78/49); total (78/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.02e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
CACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCC > NC_000913_3_pae_pgi/3316675‑3316963 | aCGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTc > 1:443299/1‑150 (MQ=255) cGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCg > 4:433784/1‑150 (MQ=255) aCTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCAc > 3:684365/1‑150 (MQ=255) cgcCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACgaga > 2:1094182/1‑150 (MQ=255) atcatcCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGGTTATCGGTGGTTTTCACCGGGAGCTTCGCACGAGAACCCCGATc > 2:473357/1‑150 (MQ=255) tcCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGa > 1:431954/1‑150 (MQ=255) cccACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAg < 4:115755/150‑1 (MQ=255) ccACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGc < 2:830581/150‑1 (MQ=255) ccACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGc > 4:719731/1‑150 (MQ=255) aGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCgct > 1:473310/1‑150 (MQ=255) gACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCgctgc > 3:718045/1‑150 (MQ=255) gATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCttt < 4:629608/150‑1 (MQ=255) gATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCAAGAGAACCCGGATCGCGAGCCGCTGCttt > 3:683483/1‑150 (MQ=255) atatCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTa > 1:714082/1‑150 (MQ=255) tatCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTaa < 3:433784/150‑1 (MQ=255) tatCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTaa > 2:478620/1‑150 (MQ=255) atCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAAt < 3:122567/150‑1 (MQ=255) cGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAAttt > 4:102009/1‑150 (MQ=255) gATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTc > 2:164652/1‑150 (MQ=255) aTACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCa > 2:1168983/1‑150 (MQ=255) aTACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCa > 3:119963/1‑150 (MQ=255) aCGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAAt > 2:94050/1‑150 (MQ=255) aCGCTCGCCACCCAGTCCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAAt < 1:1109821/150‑1 (MQ=255) cGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATc > 3:17426/1‑150 (MQ=255) gataaccACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCa > 2:1043382/6‑150 (MQ=255) gCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTGTATCGTTGGTTTTCACCGGGATTTTCGCACTAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCa > 4:294078/1‑150 (MQ=255) cTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCAc < 3:452047/150‑1 (MQ=255) ccACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAAt > 3:34107/1‑137 (MQ=255) ccACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAAt < 4:34107/137‑1 (MQ=255) cACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCActtctt > 3:38321/1‑150 (MQ=255) ccAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACAGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGc < 4:583977/150‑1 (MQ=255) aGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTc < 3:190761/150‑1 (MQ=255) aGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTgg < 1:1104516/150‑1 (MQ=255) ccGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGCTCATCGTTGGTTTTCACCGGGGTTTTCGCACGAGGCCCCGGATCGCGAGCCGCTGCTTTAATTCCAATCACTTCTTCGCCGATTTCTGGCACtt > 1:727124/1‑150 (MQ=255) cGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACtt < 1:717810/149‑1 (MQ=255) cGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACtt > 2:717810/1‑149 (MQ=255) gCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGATTATCGTTGGTTTTCACCGGGAATTTCGCACGAGAACCCGGATCGCAAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCa > 3:168983/1‑150 (MQ=255) ccTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCaa < 2:1186471/150‑1 (MQ=255) ccTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCaa > 3:211851/1‑150 (MQ=255) cTGAACGCGCGCGCCGCGTCTACCTCCGCACGCCCCTCCCGTGTCGATCCGTTTGTCGTTGGTTTTCACCGGTATTTTCGCGCGTGAACCCGTATCGCGAGCCGCTGCTTTAATTTCCATCCCTTCTTCGCCCATTTCTGGCACCTCCAt < 4:168983/150‑1 (MQ=255) cTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAAt > 3:236731/1‑150 (MQ=255) tGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATa < 2:443299/150‑1 (MQ=255) gAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATAc > 3:399692/1‑150 (MQ=255) gAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATAc > 3:399736/1‑150 (MQ=255) aaCACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACg > 2:1089743/1‑150 (MQ=255) cgcgcgCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAAc < 2:840427/150‑1 (MQ=255) cgcgcgCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAAc > 4:2190/1‑150 (MQ=255) gcgcgcCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCaa < 2:195637/111‑1 (MQ=255) gcgcgcCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCaa > 1:195637/1‑111 (MQ=255) gcCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTc < 3:743683/150‑1 (MQ=255) aCGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGAt < 4:441681/150‑1 (MQ=255) aCGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGAt < 3:2190/150‑1 (MQ=255) gCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCa < 2:431954/150‑1 (MQ=255) gtACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGc > 1:509265/2‑150 (MQ=255) aTACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGc < 1:94050/150‑1 (MQ=255) cTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCAttt > 4:199155/1‑150 (MQ=255) cTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCAttt > 3:272539/1‑150 (MQ=255) aCGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAAt < 1:1163392/125‑1 (MQ=255) aCGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAAt > 2:1163392/1‑125 (MQ=255) aCGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTcc > 2:618192/1‑150 (MQ=255) gCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCgg < 3:339365/150‑1 (MQ=255) gCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCgg > 2:1085537/1‑150 (MQ=255) aaGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTaa < 3:534977/84‑1 (MQ=255) aaGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTaa > 4:534977/1‑84 (MQ=255) gCACCTACCGGATCGATACGTTTGTCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTg < 2:714082/150‑1 (MQ=255) gCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAATAGTTCGATCAGCATTTCCGGCTTg < 1:1168983/150‑1 (MQ=255) aCCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCTCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGTAACAGTTCGATCAGCATTTCCGGCTTGGa > 2:428466/1‑150 (MQ=255) ccTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGaa < 2:342050/150‑1 (MQ=255) cTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAAc > 2:861661/1‑150 (MQ=255) tACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCaa > 2:311664/1‑113 (MQ=255) tACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCaa < 1:311664/113‑1 (MQ=255) aCCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGa < 4:17426/150‑1 (MQ=255) aCCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGa < 4:203036/150‑1 (MQ=255) ccGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAg > 3:41980/1‑150 (MQ=255) ggATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTg > 2:325606/1‑150 (MQ=255) gATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCCGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGa > 1:526864/1‑150 (MQ=255) aTCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGAc < 2:1129888/150‑1 (MQ=255) gATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGaa < 4:211851/150‑1 (MQ=255) tACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCt < 2:961257/92‑1 (MQ=255) tACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCt > 1:961257/1‑92 (MQ=255) cGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGt < 1:164652/150‑1 (MQ=255) gTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGa < 1:778956/144‑1 (MQ=255) gTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGtt < 1:1089743/150‑1 (MQ=255) gTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGtt > 3:22002/1‑150 (MQ=255) gTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATCTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGtt > 3:611861/1‑150 (MQ=255) gTTTATCGTTGGCTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGtt > 4:365708/1‑150 (MQ=255) tttATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTg > 3:748175/1‑150 (MQ=255) ttATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTgc < 4:38321/150‑1 (MQ=255) tATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTgcg > 2:835702/1‑150 (MQ=255) tCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTgcgcg > 1:959939/1‑150 (MQ=255) gTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGcc > 1:324395/1‑150 (MQ=255) ttGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGc > 1:408254/1‑111 (MQ=255) ttGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCa > 2:161571/1‑150 (MQ=255) ttttACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTGCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATCTCCGGCTTGGAACGAGTGAGGAATAGTTGCGCGCCACgcgc > 1:1148889/1‑150 (MQ=255) tttCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACa > 2:332419/1‑95 (MQ=255) tttCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACa < 1:332419/95‑1 (MQ=255) tCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGa < 2:650061/122‑1 (MQ=255) tCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGa > 1:650061/1‑122 (MQ=255) cACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTGCCGGCTTGCAACGAGTGACGAACAGTTGCGCGCCACGCGCTTc < 4:152871/150‑1 (MQ=255) aCCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTcc > 2:728207/1‑150 (MQ=255) | CACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCC > NC_000913_3_pae_pgi/3316675‑3316963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |