BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	= 3584195	NA (NA)	238 (1.810)	147/268	0.0	67.4%	intergenic (+15/‑1)	insB1/yrhA	IS1 transposase B/pseudogene, interrupted by IS1E
*	?	NC_000913_3_pae_pgi	4221464 =	115 (0.880)	238 (1.810)	147/268	0.0	67.4%	coding (1024/2187 nt)	arpA	ankyrin repeat protein

Only 100 of 238 total aligned reads displayed.

GAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/3584047‑3584195

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATTCATAAAATCC  >  NC_000913_3_pae_pgi/4221464‑4221612

GAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCC                                                                                                                                                      <  1:173478/150‑1

   TTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGG                                                                                                                                                   <  3:34947/150‑1

          GCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAAT                                                                                                                                            >  2:908994/1‑150

           CATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATG                                                                                                                                           <  3:804313/150‑1

                CCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGG                                                                                                                                      <  1:827856/150‑1

                 CTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGt                                                                                                                                     >  2:1226541/1‑149

                     ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTGTCATTATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTAT                                                                                                                                 >  1:342649/1‑150

                        TGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTC                                                                                                                              <  2:1419372/150‑1

                         GAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGA                                                                                                                                         <  1:1398335/138‑1

                           GGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATC                                                                                                                           <  1:1003482/150‑1

                           GGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATC                                                                                                                           <  1:908994/150‑1

                                       gagGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTT                                                                                                               <  3:622122/147‑1

                                        ACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTT                                                                                                              >  1:800362/1‑150

                                        ACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTT                                                                                                              <  3:903641/150‑1

                                        ACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGCGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTT                                                                                                              >  2:890904/1‑150

                                          GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCCCAGAGCCTTTTAA                                                                                                            <  4:492919/150‑1

                                          GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAA                                                                                                            <  3:327174/150‑1

                                          GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAA                                                                                                            <  4:386883/150‑1

                                          GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAA                                                                                                            <  2:196999/150‑1

                                          GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGT                                                                                                                                                  <  1:771852/112‑1

                                             TGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACAT                                                                                                         <  2:563680/150‑1

                                                GACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAA                                                                                                      >  3:916131/1‑150

                                                   GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAG                                                                                                   >  3:320758/1‑150

                                                     AAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCT                                                                                                 <  1:1088/150‑1

                                                        TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTT                                                                                              >  2:220669/1‑150

                                                         CGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTC                                                                                             <  3:661168/150‑1

                                                          GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCT                                                                                            >  1:613377/1‑150

                                                          GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCT                                                                                            >  1:1077008/1‑150

                                                          GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTAT                                                                                                                                 >  1:275223/1‑113

                                                          GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTAT                                                                                                                                 <  2:275223/113‑1

                                                              TCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCG                                                                                        >  3:756393/1‑150

                                                                    TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTTTTTCGGAAGTG                                                                                  >  2:831267/1‑150

                                                                    TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTG                                                                                  >  2:864097/1‑150

                                                                      AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATCAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCT                                                                                <  2:175974/150‑1

                                                                      AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTG                                                                                                                                                 >  2:523063/1‑85

                                                                      AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTG                                                                                                                                                 <  1:523063/85‑1

                                                                       AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTG                                                                               >  3:68269/1‑150

                                                                       AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTG                                                                               <  1:11636/150‑1

                                                                        AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCA                                                                                                                             >  3:161711/1‑103

                                                                        AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCA                                                                                                                             <  4:161711/103‑1

                                                                              TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTAT                                                                        <  1:289034/150‑1

                                                                              TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTAT                                                                        >  4:814037/1‑150

                                                                               GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATT                                                                       <  4:916131/150‑1

                                                                                 AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATC                                                                                                                           >  4:709530/1‑96

                                                                                   CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAA                                                                   <  2:47550/150‑1

                                                                                        TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGAT                                                              >  3:431669/1‑150

                                                                                        TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTT                                                                                                               <  4:560535/101‑1

                                                                                         GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATT                                                             >  1:36652/1‑150

                                                                                         GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATT                                                             >  1:836489/1‑150

                                                                                          ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGG                                                                                                                                      <  4:207189/76‑1

                                                                                          ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGG                                                                                                                                      >  3:207189/1‑76

                                                                                           CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGA                                                           <  2:412234/150‑1

                                                                                           CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATT                                                                       >  2:501175/1‑138

                                                                                           CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTT                                                                                                               >  1:251389/1‑98

                                                                                            AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGAT                                                          <  2:306864/150‑1

                                                                                            AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGAT                                                          >  2:390067/1‑150

                                                                                             AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATT                                                         <  4:431669/150‑1

                                                                                             AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATT                                                         <  2:800362/150‑1

                                                                                             AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAAT                                                                                                                                            <  3:200671/67‑1

                                                                                                  ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATT                                                                       <  1:674964/131‑1

                                                                                                    CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGCCATCAACCAGGTGATTATGAAGGGGTTAGTTCATCGACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACA                                                  <  1:1043666/150‑1

                                                                                                         ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATC                                             <  1:584970/150‑1

                                                                                                             TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTT                                         >  3:122595/1‑150

                                                                                                               TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGA                                       >  1:1316095/1‑150

                                                                                                                GAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGAC                                      >  1:446846/1‑150

                                                                                                                    ATAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGAT                                                              <  2:860552/122‑1

                                                                                                                     tacAACACTATCAATAAGTTGGAGTCATTACCCAGGCGATCATGGAGGGGTTCTTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTT                                 <  1:890904/147‑1

                                                                                                                     TAAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTT                                 >  1:1486837/1‑150

                                                                                                                      AAAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTC                                >  2:1141954/1‑150

                                                                                                                       AAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCA                               >  2:600572/1‑150

                                                                                                                       AAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGAT                                              <  1:1075617/135‑1

                                                                                                                       AAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGAT                                              >  2:1075617/1‑135

                                                                                                                       AAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTT                                                                                                                <  1:984939/69‑1

                                                                                                                       AAACACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTT                                                                                                                >  2:984939/1‑69

                                                                                                                          CACTATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGA                            >  3:228760/1‑150

                                                                                                                             TATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGC                         >  3:711667/1‑150

                                                                                                                             TATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGC                         >  2:336858/1‑150

                                                                                                                             TATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGC                         >  3:466419/1‑150

                                                                                                                              ATCAATAAGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTAT                                                                        <  2:543569/102‑1

                                                                                                                                     AGTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCT                 <  2:762603/150‑1

                                                                                                                                      GTTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTA                >  4:615529/1‑150

                                                                                                                                       TTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTAC               >  1:1266565/1‑150

                                                                                                                                       TTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTAC               <  2:574795/150‑1

                                                                                                                                       TTGGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAA                                                       >  1:457210/1‑110

                                                                                                                                         GGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACAT             <  3:579682/150‑1

                                                                                                                                         GGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTT                                         <  3:539564/122‑1

                                                                                                                                         GGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATC                                                                                                                           >  2:531849/1‑40

                                                                                                                                         GGAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATC                                                                                                                           <  1:531849/40‑1

                                                                                                                                          GAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATT            <  2:1486837/150‑1

                                                                                                                                          GAGTCATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATT            <  2:638353/150‑1

                                                                                                                                               ATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATTCATAA       >  1:483583/1‑150

                                                                                                                                               ATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTAT                                                                        <  2:117208/85‑1

                                                                                                                                               ATTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTAT                                                                        >  1:117208/1‑85

                                                                                                                                                TTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATTCATAAA      <  4:159368/150‑1

                                                                                                                                                TTACCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATG                                                >  4:310933/1‑108

                                                                                                                                                   CCCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATTCATAAAATC   <  2:1027790/150‑1

                                                                                                                                                    CCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATTCATAAAATCC  >  4:182614/1‑150

                                                                                                                                                    CCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATTCATAAA      <  1:1046722/146‑1

                                                                                                                                                    CCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATTCATAAA      >  2:1046722/1‑146

                                                                                                                                                    CCAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACACTCATAAAATCC  >  1:1200866/1‑150

GAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/3584047‑3584195

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGTGATAATGGAGGGGTTATTTCATCCACAGATCCTTTTAACATCAATAGCTGTTCTTTCGGAAGTGCTGGAATTATTGCAACAGATTGATTAATAACATGATCATTTGACCATTTCAGGAGGCTATAATCTACATTCATAAAATCC  >  NC_000913_3_pae_pgi/4221464‑4221612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.