New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_pgi = 2098422625 (3.700)44 (0.280) 29/236 9.9 7.0% intergenic (‑121/+25) wzzB/ugd regulator of length of O‑antigen component of lipopolysaccharide chains/UDP‑glucose 6‑dehydrogenase
?NC_000913_3_pae_pgi = 2098429 579 (3.660)intergenic (‑128/+18) wzzB/ugd regulator of length of O‑antigen component of lipopolysaccharide chains/UDP‑glucose 6‑dehydrogenase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 158 total aligned reads displayed.

GTTTTGCCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/2098266‑2098422
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagggcTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAATA  <  NC_000913_3_pae_pgi/2098429‑2098283
                                                                                                                                                                                                                                                                                                                
GTTTTGCCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAA                                                                                                                                                            >  1:37970/1‑150
GTTTTGCCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAA                                                                                                                                                            >  1:1574388/1‑150
GTTTTGCCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAA                                                                                                                                                            <  1:162258/150‑1
 TTTTGCCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAAT                                                                                                                                                           <  1:468404/150‑1
 TTTTGCCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAAT                                                                                                                                                           >  3:36123/1‑150
  TTTGCCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATC                                                                                                                                                          <  1:540472/150‑1
     GCCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGG                                                                                                                                                       <  4:1194937/150‑1
     GCCCAGAAAAATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGG                                                                                                                                                       >  1:1450112/1‑150
      CCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGG                                                                                                                                                      >  1:700505/1‑150
       CCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC                                                                                                                                                     <  1:437697/150‑1
       CCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC                                                                                                                                                     >  1:694796/1‑150
       CCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC                                                                                                                                                     <  4:1175332/150‑1
       CCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTCCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAGTGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC                                                                                                                                                     >  1:1160216/1‑150
        CAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC                                                                                                                                                     >  3:722843/1‑149
        CAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC                                                                                                                                                     <  4:722843/149‑1
              CATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAG                                                                                                                                                        <  1:883155/140‑1
              CATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAG                                                                                                                                                        >  2:883155/1‑140
                   TTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATC                                                                                                                                                          >  1:1789796/1‑133
                     ATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGA                                                                                                                                       <  1:903296/150‑1
                     ATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGA                                                                                                                                       <  2:1727974/150‑1
                      TTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGAa                                                                                                                                      <  2:2087968/150‑2
                      TTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGAT                                                                                                                                      <  2:399509/150‑1
                      TTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGCCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGAT                                                                                                                                      <  2:1587634/150‑1
                       TTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATTATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATT                                                                                                                                     <  1:1956665/150‑1
                       TTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATT                                                                                                                                     <  1:775694/150‑1
                       TTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATT                                                                                                                                     <  4:1125952/150‑1
                       TTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATT                                                                                                                                     <  2:1793718/150‑1
                       TTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATT                                                                                                                                     <  2:218201/150‑1
                           TACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCT                                                                                                                                 <  3:745879/150‑1
                            ACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCTT                                                                                                                                <  2:956642/150‑1
                                TCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCTTTTGT                                                                                                                            <  2:1624282/150‑1
                                TCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGG                                                                                                                                                       >  1:1337012/1‑123
                                TCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGG                                                                                                                                                       <  2:1337012/123‑1
                                TCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAG                                                                                                                                                        >  4:373073/1‑122
                                   TCATTACCCTAACTGACGGCAATTTCCAAGTCCGCAGAGTTTAGAAATAATCGTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATATACGCCCTGATTGCCTTTTGTTAC                                                                                                                         <  2:993200/150‑1
                                             AACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCT                                                                                                                                 <  4:287711/132‑1
                                                TGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCTTTTGTT                                                                                                                           <  2:1847817/135‑1
                                                TGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCTTTTGTT                                                                                                                           >  1:1847817/1‑135
                                                  ACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGG                                                                                                                                                       >  2:1706511/1‑105
                                                  ACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCA                                                                                                                                                         <  4:369140/103‑1
                                                  ACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCA                                                                                                                                                         >  3:369140/1‑103
                                                    GGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGA                                                                                                                                       <  1:1055481/119‑1
                                                    GGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGA                                                                                                                                       >  2:1055481/1‑119
                                                      AAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATT                                                                                                                                     <  3:489620/119‑1
                                                      AAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATT                                                                                                                                     >  4:489620/1‑119
                                                         TTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATC                                                                                                                                                          <  2:689822/95‑1
                                                            CCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGG                                                                                                                                                      <  1:1845545/96‑1
                                                                GTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGTTAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTAATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACT                                                                                            <  2:1450112/150‑1
                                                                             AGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC                                                                                                                                                     <  3:231137/80‑1
                                                                             AGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC                                                                                                                                                     >  1:407191/1‑80
                                                                             AGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC                                                                                                                                                     >  4:231137/1‑80
                                                                             AGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAG                                                                                                                                                        <  2:2117641/77‑1
                                                                               CGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATT                                                                                                                                     <  1:964430/94‑1
                                                                                 ATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGG                                                                                                                                                       <  4:550204/74‑1
                                                                                 ATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGG                                                                                                                                                       >  3:550204/1‑74
                                                                                   AATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCA                                                                                              >  2:1000785/1‑129
                                                                                   AATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCA                                                                                              <  1:1000785/129‑1
                                                                                        TCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCTTTT                                                                                                                              <  2:190870/92‑1
                                                                                                                                     TAAGTAACAAAAGACAATCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACTAGCATTATCGCTAAACTATGCGGACTTGGACATTTCCGTTAGTTAGGGTAA                       >  2:1056707/1‑150
                                                                                                                                             AAAAGACAATCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGA               >  4:900613/1‑150
                                                                                                                                                     ATCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAA       <  2:2104988/150‑1
                                                                                                                                                     ATCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTAT                                                                  <  2:791998/91‑1
                                                                                                                                                     ATCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTAT                                                                  >  1:791998/1‑91
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAAT      >  4:1228878/1‑150
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAAT      >  1:504274/1‑150
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAAT      >  4:913116/1‑150
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGT                                   <  4:927417/121‑1
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGT                                   >  3:927417/1‑121
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGAC                                                 <  2:1204377/107‑1
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGAC                                                 >  1:1204377/1‑107
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATG                                                      <  2:937758/102‑1
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATG                                                      >  1:937758/1‑102
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTA                                                             >  1:2109312/1‑95
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTT                                                                                                   <  1:1287601/57‑1
                                                                                                                                                      TCAGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTT                                                                                                   >  2:1287601/1‑57
                                                                                                                                                      TCAGGGCTATTTACGCCCCGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAAT      >  4:768827/1‑150
                                                                                                                                                      TCAGGGCTAATTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAAT      >  3:422167/1‑150
                                                                                                                                                        AGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTTTGTCAGTTAGGGTAATGATGAGAGTAGAAAATAA    >  1:349325/1‑150
                                                                                                                                                        AGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAA    >  2:739698/1‑150
                                                                                                                                                        AGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAA    >  2:816003/1‑150
                                                                                                                                                        AGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCA                                 >  2:448907/1‑121
                                                                                                                                                        AGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATG                                                      <  3:558902/100‑1
                                                                                                                                                        AGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATC                                                                                        <  2:1377003/66‑1
                                                                                                                                                        AGGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATC                                                                                        >  1:1377003/1‑66
                                                                                                                                                         GGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAAT   >  2:700505/1‑150
                                                                                                                                                         GGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAAT   >  3:712111/1‑150
                                                                                                                                                         GGGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAAT   <  3:381215/150‑1
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACAGAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGGCAGTTAGGGTAATGATGAGAGTAGACAATAATA  >  1:1994534/1‑150
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAATA  <  3:88189/150‑1
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAATA  >  2:1283016/1‑150
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAATA  >  3:38343/1‑150
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAA         <  2:1595520/143‑1
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCA                                 <  2:1449094/119‑1
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCA                                 >  1:1449094/1‑119
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCC                                     <  3:881713/115‑1
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTAT                                                                  >  4:1039370/1‑86
                                                                                                                                                          GGCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTAT                                                                  <  3:1039370/86‑1
                                                                                                                                                           GCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCAC                                                                           >  4:857947/1‑76
                                                                                                                                                           GCTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTA                                                                                          <  1:158901/61‑1
                                                                                                                                                            CTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATC                                                                 >  1:1696892/1‑85
                                                                                                                                                                                                                                                                                                                
GTTTTGCCCAGAAACATTATTATTTTCTACTCTCATCATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAAGTGATAAAAATAATGAATTGTTGTGTAAGTAACAAAAGACAATCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/2098266‑2098422
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagggcTATTTACGCCCTGATTGTCTTTTGTTACTTACACAACAATTCATTATTTTTATCACTTATCCTATAGCATTCACGAGGATTATCGCTAAACTATGCGGACTTGGAAATTTCCGTCAGTTAGGGTAATGATGAGAGTAGAAAATAATA  <  NC_000913_3_pae_pgi/2098429‑2098283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.