| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 3,539,413 | C→T | 8.3% | L677L (CTG→TTG) | yhgF → | putative transcriptional accessory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 3,539,413 | 0 | C | T | 8.3% | 161.2 / 3.5 | 62 | L677L (CTG→TTG) | yhgF | putative transcriptional accessory protein |
| Reads supporting (aligned to +/- strand): ref base C (29/26); new base T (2/4); total (32/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
CGATCCGCGTCCGGAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATGAGCAGCCTG > NC_000913_3_pae_pgi/3539265‑3539560 | cgATCCGCGTCCGGAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGcc > 1:250795/1‑149 (MQ=255)cgATCCGCGTCCGGAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGcc < 1:877314/149‑1 (MQ=255) gATCCGCGTCCGGAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCCAGTTTGTCGATATTGGCGTGCATCAGGACGGccg > 2:893802/1‑148 (MQ=255) ttcGGAATTTAAACCCGCTCAGGTTGCCGATGGCGTCGAGACAATGATCGGCCTGTAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTcaca < 2:159517/147‑1 (MQ=255) tCCGGAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTcaca < 2:159594/149‑1 (MQ=255) gccGGGATTTAAAACCGCTCAGGGTGCCGATGGCGTCGAGACCATGAAAGACCTCCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTcaca < 2:801855/148‑1 (MQ=255) ggAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGAGCGATTGTCAATATTCGCGTGCATCAGGAAGGACTGGTTCACAtct > 1:938561/1‑149 (MQ=255) gAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACAtctc < 1:356311/149‑1 (MQ=255) aaTTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGAGCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCCATACTGACTTGGATCAGGACGGCCTGGTTCACATctct < 2:720294/149‑1 (MQ=255) aaaCCGCTCAGTTTGCCGATGGCGACGAGACAATGAACGACCAGCAACCGGGTATGACCCTCGAAGGCGCAGTGACCAACGTCCCCAACTTTGGCGCGTATGTCGATATGGGCGTGCAGAAGGACCGGCTGGTTCACATCTCTTCAtgg > 1:109519/1‑147 (MQ=255) aaaCCGACCAGGTCGCTGATCGCGTCGAGACACTGAACTACCTTCAACCGGGTATGATCCTCGAAGGCGCAGTGCCCAACGACAACAACTTCGGCGCCTTTGTCGATATTGTCGTGCATCAGGACTTCCGGGTTCACATCTCTTCATTg < 2:164733/149‑1 (MQ=255) aaCCGCTCAGTTTGCCGATGTCGTCGAGACGATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGATCAGATCTCTTCATTGt > 1:976741/1‑149 (MQ=255) aCCGCTCAGTTTGCCGATTGCGTCAAGACAATGACCGACCTGCAACCTTGTATGAGCCTCGAACGCGCAGTGACCAATGGCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTc < 1:893802/149‑1 (MQ=255) cTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTCGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAAc > 1:894628/1‑149 (MQ=255) cGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTATGGCGCGTTTGTCGATATTGGAGAGCATCAGGACGGCCTGGTTCACATCACTTCATTGTCGAACAAGTTTGTgg > 1:354837/1‑149 (MQ=255) gATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGCCCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCACGACGGCCTGGTTCACATCTCTTCATTGTCTACCCAGTGTGTGGa > 2:78265/1‑149 (MQ=255) aTGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGaa < 1:913504/149‑1 (MQ=255) gTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATcc > 2:514021/1‑149 (MQ=255) gTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACAAACTTTGGCGCGGTCGTCGAGATTGGCGTGCATCAGGACGCCCTGGTTTACATCACTTCATCATCGAACAGATTTGTGGAACATcc > 2:918300/1‑149 (MQ=255) aaTGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACAGCCTGGTTCACATCTATTCATTGTCGAACAAGTTTGTGAAACATCGCCATCCCg > 2:15144/1‑149 (MQ=255) gatcGACCTGCAAACGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATGGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCgtgg < 1:269969/146‑1 (MQ=255) tGCAACCGGTTATGAGCCTCGAAGGCGCAGTGACCAACGTCACAAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCg < 2:793672/149‑1 (MQ=255) cAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCAtt > 1:839979/1‑104 (MQ=255) cAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCAtt < 2:839979/104‑1 (MQ=255) gTATGATCCGCGAAGGTGGCGGGACCATAGTCACAAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACAtt < 2:591623/149‑1 (MQ=255) gctcgtCGAAGTGGCAGGGGCCAACGTGACCAACTTTGGCGCGTTTGTCGATAGTAGTGTGCATCAGGACGGACAGATTCACAGCTCTTCATTGTCGAACCAGTTTGTGGAAGATCCGCATACCGTGTTGAAATCGGGCGACATTGTGa < 2:985580/144‑1 (MQ=255) gATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGa > 1:507222/1‑149 (MQ=255) aTCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGaa > 1:6006/1‑149 (MQ=255) aTCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCCTGTTGAAAGCGGGCGACACTGTGaa > 1:729800/1‑149 (MQ=255) tCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCGTTGTCGAACAAGGTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGGGACGTTGTGAAg > 1:909713/1‑149 (MQ=255) tCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCg > 2:833753/1‑134 (MQ=255) tCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCg < 1:833753/134‑1 (MQ=255) gcgcGAAGGCGGAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCTTGGCTCACATCTCTTCTTTTGCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAgg < 2:416853/146‑1 (MQ=255) cTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGGCGGCCTGGTTCACATCTCTTCATTGGCGAACAAGTTTGTGGGAGCTTGACATCCCTGGGTGAAAGCGGGCGACGTtgcagaggt > 1:779813/1‑142 (MQ=255) cgcAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGc < 1:1004071/149‑1 (MQ=255) cAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATCTTGGCTTGCATCAGGACGGCTTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTg > 1:144944/1‑149 (MQ=255) cAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCTTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAAGTGAAAGTGCTg > 1:428987/1‑149 (MQ=255) tGACCAACGTCACCAACGTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACACTTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGaa < 1:484659/149‑1 (MQ=255) aaCGTCACCAACTGTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAACCGCTGGAAGTgca < 2:492648/149‑3 (MQ=255) aCGGCACCAACTTTGGCGCGGTGGGCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGTAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGAt < 2:296125/149‑1 (MQ=255) cGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGTCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATc < 1:753092/149‑1 (MQ=255) tCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCtt > 1:370325/1‑149 (MQ=255) cAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGc < 1:184630/149‑1 (MQ=255) tttGGCGCGTTTGTCGATATTGGCATGCATCAGGACGGCCTGGTTCACAGCTCTTCATTGTCGAACACGGTTGTGGAAGATCCGCATACGGTGGTGAAAGCGGCCGACATTGTGAAGGTGAAAGTGCTGGGAGGGGACCCTCAGCGTaa > 2:579091/1‑149 (MQ=255) ttgcgcGTTTGTCGATATTGGCGTGCATCAGGACGGCTTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAAc < 2:144944/147‑1 (MQ=255) tGGCGGGTTTGTCGATATTGGCGTGCATCAGGACGGCTTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAAc < 2:428987/149‑1 (MQ=255) cgcgTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTCAAAACGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGCTCTTCGGCGTGAACATa > 2:264946/1‑149 (MQ=255) gggTTTGTCGATTTTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTAt < 2:860956/147‑1 (MQ=255) gTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCg > 1:50872/1‑149 (MQ=255) gTCGATATTGGCGTGCATCAGGACGGCATGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGGCCt > 2:732781/1‑149 (MQ=255) gTCAATATTGGCTTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCt < 1:465283/149‑1 (MQ=255) atTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGTTCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTAt < 1:81375/149‑1 (MQ=255) ttGGTGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATg < 2:176204/149‑1 (MQ=255) gCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATgcgc > 2:924272/1‑149 (MQ=255) gCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTATGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGGCCTGACTATgcgc > 2:850329/1‑149 (MQ=255) gTGCATCAGGACGGTCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCt < 1:58323/149‑1 (MQ=255) gTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCCCCt > 2:934492/1‑149 (MQ=255) tGCATCAGGAGGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTg < 2:709325/149‑1 (MQ=255) agcAGGACTGCTTGGTTAACATCTTTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGATATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGAt < 2:768028/147‑1 (MQ=255) tCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGGGGAGAAAGACGGCGACATTGGGCAGGAGAGAGTGCAGTAAGTGGGTCTTCAGCGTAACAGTATCGCCGTGGCTAGTGTCCTGGATg > 2:57436/1‑149 (MQ=255) ggACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATGagc > 2:851549/1‑149 (MQ=255) gACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATGagca > 1:536852/1‑149 (MQ=255) gACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCATGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATTagca > 1:536630/1‑149 (MQ=255) aCGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATGagcag > 2:229762/1‑149 (MQ=255) cGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGTGTAAACGTATCACCCTGACTATGAGCCTGGATGagcagc > 1:126770/1‑149 (MQ=255) ccTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTTAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATGAGCAGCCTg < 1:256302/149‑1 (MQ=255) ccTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAACGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGTTCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATGAGAAGCCTg > 1:167145/1‑149 (MQ=255) ccTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACAtt < 2:927081/73‑1 (MQ=255) ccTGGTTCACATCTCTTCATTGTAGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACAtt > 1:927081/1‑73 (MQ=255) | CGATCCGCGTCCGGAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATGAGCAGCCTG > NC_000913_3_pae_pgi/3539265‑3539560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |