| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 4218934 = | 645 (11.450) | 13 (0.240) | 12/264 | 3.9 | 2.1% | coding (339/1737 nt) | aceK | isocitrate dehydrogenase kinase/phosphatase |
| ? | NC_000913_3_hsa_pgi | 4218956 = | 601 (11.230) | coding (361/1737 nt) | aceK | isocitrate dehydrogenase kinase/phosphatase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGGCGCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_pgi/4219086‑4218934‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcggCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAA > NC_000913_3_hsa_pgi/4218956‑4219103 AGGCGCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGA > 1:642279/1‑149AGGCGCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGA < 2:547204/149‑1 GGCGCCGCGGTAGGAAGCTGTTAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAATGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCACGAGAGTAAGCGAG < 2:905505/149‑1 ggGCAGCGGTAGGTCGCTGAAAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGC < 2:115181/147‑1 GCGCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGC > 1:160747/1‑149 CGCAGCGTGAGGTCGCGTATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCG < 1:709529/149‑1 CGCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCG < 1:120067/149‑1 CGCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCG < 1:435911/149‑1 CGCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCG < 1:387572/149‑1 CGCAGCGGTAGGTCGCTGATAACCCGCATCAGTAGCGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCG < 1:437476/149‑1 GCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCGCAGCCGTGATCGGGGTGAAAGTCTTTAGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCGG > 2:180281/1‑149 GCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGCAAGTCTTTCGCCCGCGGGCGGGGAATGGTACGAAAGCGGCGATCTGGCTGAGAGCTAAAGCTAAAAAGCCGCTCGGCAGTAAGCGACCGG > 2:467634/1‑149 GCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCGG < 1:26381/149‑1 GCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCGG > 1:608013/1‑149 GCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCGG > 1:613661/1‑149 AATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGA < 1:297985/63‑1 AATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGA > 2:297985/1‑63 TGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGT > 2:828750/1‑149 AAGATAAAAAGCCGCTCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCAGCTGGCGAAAGACTTTCACCCCGATGACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGA > 2:920806/1‑149 AAAGCCGCTCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCG > 2:338909/1‑149 AAAGCCGCTCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTCATCAGCGACCTACCG > 2:516856/1‑149 AGCCGCTCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGA > 2:756465/1‑50 AGCCGCTCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGA < 1:756465/50‑1 GCCGCTCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAGGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTG > 1:890663/1‑149 GCTCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGA > 1:216292/1‑136 GCTCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGA < 2:216292/136‑1 TCGGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCCTTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGGTGCGCCT > 1:217708/1‑149 GGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTG > 2:727057/1‑102 GGGAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTG < 1:727057/102‑1 GAGTAAGCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCCGCGACCTACGGCTGCGCCTGCGC > 2:638001/1‑149 CGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGA > 1:112851/1‑149 CGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTAC < 2:165369/128‑1 CGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTAC > 1:165369/1‑128 CGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAA < 1:563024/70‑1 CGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAA > 2:563024/1‑70 GAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAA < 1:184313/149‑1 GAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAA > 1:557305/1‑149 GAGCAGCTTTTTATCTTTAGCCCTCAGCCAGAGCGCCGCTTCCGTACCATTCCCCGCCCGCTGTCGAAAGACTTTCACCCCGATCACGGCTCGGAATCTCTACTGATGCGCGTTGTTAGCGACCTACCGCTGCGCCTGCGCTGGCAGAA < 1:466762/149‑1 gGCGCCTTTTTTCCTCTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCTCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAAT < 2:447610/148‑1 AGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTCCCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAAT < 1:975368/149‑1 AGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCTCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAAT < 2:920788/149‑1 CGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTCCGCCTGCGCTGGCAGAATAA > 2:469001/1‑149 CGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACAATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGAGCTACCGCTGCGCCTGCGCTGGCAGAATAA > 1:200785/1‑149 GGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAA > 2:729530/1‑149 GGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAA > 1:575935/1‑149 GGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAA < 2:100989/149‑1 GCTTTTTTTCTTTCGCTCTCATCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAA < 2:939725/149‑1 GCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAA > 1:359403/1‑149 GCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAA < 1:758019/149‑1 GCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAA < 2:916492/149‑1 GCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAA < 1:960136/149‑1 AGGCGCAGCGGTAGGTCGCTGATAACGCGCATCAGTAGAGATTCCCAGCCGTGATCGGGGTGAAAGTCTTTCGCCAGCGGGCGGGGAATGGTACGAAAGCGGCGCTCTGGCTGAGAGCTAAAGATAAAAAGCCGCTCGGGAGTAAGCGAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_pgi/4219086‑4218934‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcggCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAA > NC_000913_3_hsa_pgi/4218956‑4219103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |