New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	= 258674	NA (NA)	95 (0.950)	72/294	0.3	95.0%	intergenic (+775/‑2)	crl/crl	pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
	?	NC_000913_3_hsa_pgi	319809 =	5 (0.050)					coding (193/1326 nt)	rclA	reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide‑dependent disulfide oxidoreductase family

GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_pgi/258528‑258674 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTAATGTTTT  >  NC_000913_3_hsa_pgi/319809‑319956                                                                                                                                                                                                                                                                                                         GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                                                                                    >  2:835461/1‑149 GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                                                                                    <  1:1063483/149‑1    ATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTGAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAGGCCACTGGAGCGCCTCAAAAACACCATCATACACTAAATCAGTACGTTGGCAGCATCACCAAAA                                                                                                                                                 >  1:1064682/1‑149    ATAGCGCTGATGTCCGGCGGTGCTTTTGCAGTTACGCACCACCACGTCAGTAGCTGAACAGGAGGGACAGACGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAA                                                                                                                                                 >  1:604861/1‑149     TAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACTGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTTAGTTGGCAGCATCACCAAGAT                                                                                                                                                >  1:1361180/1‑149      AGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATC                                                                                                                                               >  1:676684/1‑149               GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTTAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTG                                                                                                                                      >  1:833960/1‑149               GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTCTCTGCTG                                                                                                                                      >  2:283825/1‑149               GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCCGTGTGCTG                                                                                                                                      <  2:676684/149‑1                  CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAACTCTGTGTGCTGCTG                                                                                                                                   <  1:180809/149‑1                  CGGCGGTGCTTTTGCCGTTACGCACAACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCgg                                                                                                                                   >  1:780612/1‑147                      GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCG                                                                                                                               >  1:1002594/1‑149                      GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAACCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCG                                                                                                                               >  1:1596355/1‑149                       GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGATGATAGAAACAGCAGCCACTGGAGCACCTCAAAACCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTTTGCGT                                                                                                                              >  2:745272/1‑149                          CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGACACAGCAGCCACTGGAGCACCTCAAAACCACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCAT                                                                                                                           >  2:554065/1‑149                          CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCAT                                                                                                                           <  1:731526/149‑1                           TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATG                                                                                                                          <  2:767645/149‑1                            TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGTAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGA                                                                                                                         >  1:605685/1‑149                              TGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAAC                                                                                                                       <  2:669620/149‑1                                  GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGCGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGATCCAAT                                                                                                                   >  1:1608077/1‑149                                  GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAAT                                                                                                                   <  1:1303298/149‑1                                  GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAAT                                                                                                                   <  1:1130016/149‑1                                       GCACCACCCCGTTAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTT                                                                                                              <  2:833960/149‑1                                        CACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGTAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTG                                                                                                             <  2:605685/149‑1                                         ACCACCCCGTCAGTAGCTGAACAGGAGGGACATCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGG                                                                                                            <  2:1317106/149‑1                                           CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGCAACAGAAGCCACTGGAGCCCCTCAAAAACAACATCATACACTAAATCAGTAAGTTGGCAGAATCAGCAAAATCTGTGTGCAGCGTTGGGTCATGAACCAATGTTTTGGTT                                                                                                          >  1:1459277/1‑149                                           CACCCCGTCAGTAGCTGAACAGGAGGGACAGCGGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTT                                                                                                          <  2:314330/149‑1                                            cCCCCGTCAGTAGCTGAACAGTAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGAGCTGCTGTGCGTCATGAACCAATGTTTTGGTTG                                                                                                         <  2:1596355/148‑1                                            ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTG                                                                                                         <  1:280261/149‑1                                            ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTG                                                                                                         <  2:1002594/149‑1                                             CCCCGTCCGTCGCTGAACAGGAGGGACAGCTCATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAACTCAGTAAGTTGGCCGCATCACCAAACTCTGTGTGCTGCTGTGCGGCATCAACCAATGTTTTGGTTGG                                                                                                        <  2:1089032/149‑1                                              CCCGTCAGTAGCTGAACAGGAGGGACAGATGATAGAAACAGAAGCCACTGGAGCACATCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCACTGTTTTGGTTGGG                                                                                                       <  1:898223/149‑1                                                   aAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGTAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGTCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCA                                                                                                  <  2:636889/148‑1                                                       AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCG                                                                                              >  1:1573704/1‑149                                                        GCTGAACAGGCGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCCTACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGA                                                                                             <  2:980715/149‑1                                                        GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGA                                                                                             <  1:835461/149‑1                                                          TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATA                                                                                           >  2:1357133/1‑149                                                           GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATAT                                                                                          >  2:765289/1‑149                                                           GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGATGTGCGTCATGAACCAATGGTTTGGTTGGGATGCAGCCGATAT                                                                                          >  2:1339067/1‑149                                                              CAGGAGGGACAGCTTATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTACATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAA                                                                                       <  2:278672/149‑1                                                               AGGAGGGACACCTGAAAGAAACACAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCGGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAAT                                                                                      <  1:103472/149‑1                                                                 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGACGATATTAATAC                                                                                    >  2:1150165/1‑149                                                                 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCAACACCAAAATCTGTGTTCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATAC                                                                                    >  2:782594/1‑149                                                                    gcACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACGATCAAACACTAAATCAGTAAGTTGGCAGCATCACCAAACTCTGTGTGCTGCTGTGCGTCATGAAGCAATGGTTTGGTTGGGAAGCAGCAGATATTAATGCAGG                                                                                 >  2:753965/3‑149                                                                     GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACCCTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAAAGTTTAGTTTGGGATGCAGCCGATATTAATACAGGa                                                                                >  2:101583/1‑148                                                                       CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCACAAACACCATCATACACTTAATCAGTAAGTTGGCAGCAGCACCAAAAGCTGTGTGCTGCTGTGCGTCATGACCCAATGTATTGGTAGGGATGCAGCCGATATTAATACAGGTCC                                                                              >  1:925104/1‑149                                                                        AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCTGCAGCTAACTCTGTGTGCTGCTGTGCGTCATGAAGCAATGTTTTGGTTGGGATGCAGCCGATATTACTACAGGTGCC                                                                             >  2:1392282/1‑149                                                                          CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGC                                                                           >  1:1609429/1‑149                                                                           TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCC                                                                          >  1:680279/1‑149                                                                           TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCC                                                                          >  1:281971/1‑149                                                                           TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATCTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCAGCC                                                                          >  2:648717/1‑149                                                                            GATAGGAACAGAAGCCACTGGAGCACCTCAAAAACACCATCCTACACTTAATCAGTAAGTTGGCAGCATCAACAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATTCAGGTCCCGCCA                                                                         >  1:184076/1‑149                                                                                 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATTCAT                                                                    >  2:439754/1‑149                                                                                    CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGC                                                                 >  2:1187117/1‑149                                                                                     AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCA                                                                <  2:594286/149‑1                                                                                        AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTT                                                             <  1:218857/149‑1                                                                                         GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTG                                                            >  1:276125/1‑149                                                                                            ACTGGAGCACCTCAAAAACACCATCATTCACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATT                                                         >  2:308377/1‑149                                                                                               GGAGCACCTCAAAAACACCATCATACACTAACTCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTT                                                      <  1:372645/149‑1                                                                                                GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTC                                                     <  2:281971/149‑1                                                                                                    ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCGGTGCGTCATGAACCAATGTTTTGGATGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATG                                                 <  1:472602/149‑1                                                                                                     CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGA                                                >  1:568511/1‑149                                                                                                      CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAG                                               >  1:1430209/1‑149                                                                                                      CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAG                                               >  1:237049/1‑149                                                                                                       TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCATCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGA                                              <  1:554065/149‑1                                                                                                       TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGA                                              >  1:567326/1‑149                                                                                                       TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGA                                              >  2:1597467/1‑149                                                                                                         AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGC                                            >  1:694447/1‑149                                                                                                         AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGC                                            >  2:1365369/1‑149                                                                                                           AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGAGCTGCTGAGCGTCATGAACCAATGTTTTGGTTGGGATGCCGCCGAGATTAATACAGGTCCCGCCATACATTGAAGTTCATTGTTCGATGAGAGCCA                                          >  1:1074325/1‑149                                                                                                              atCCATCATACAATAAATCAGTAAGTTTTCAGCATCACCAATATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTTGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTC                                       <  1:1339067/147‑1                                                                                                              CACCATCATCCACTAAATCAGTAAGTTGGCAGCATCACCAAACGCTGTGTGCTGCTGTGCGTCATGAACCAATGATTTGGTTGGGATGCAGCCGATATTAATACAGGGCCCGCCATACATTGCATTTGATAGTTCGATGAGAGCCACTC                                       <  2:332784/149‑1                                                                                                              CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTC                                       <  1:765289/149‑1                                                                                                                  ATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCA                                   >  2:1088494/1‑149                                                                                                                   TCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCTGCCGATATTAATACAGGTCCCGCCATACATTCCATTTGATTGTTAGATGAGAGCCACTCGCCAA                                  >  1:963240/1‑149                                                                                                                      TACACTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCT                               >  1:725951/1‑149                                                                                                                          CTAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTTCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTT                           >  1:1311995/1‑149                                                                                                                           TAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTT                          >  1:616880/1‑149                                                                                                                           TAAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTT                          >  1:1448408/1‑149                                                                                                                            AAATCAGTAAGTTTGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACAATGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTT                         <  2:604861/149‑1                                                                                                                            AAATCAGTAAGTTGGCAGCATGACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTT                         <  1:753965/149‑1                                                                                                                            AAATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAAACAATGTTTTGGTTGGGATGCAGCCGATATTAATACTGTTCACGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTT                         <  1:794868/149‑1                                                                                                                            AAATCAGTAAGTAGGCAGCATCACCAAAAGCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGATCGATGAGAGCCACGCGCCAACCTGCTTTT                         <  2:77708/149‑1                                                                                                                             AATCAGGAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGGGCGTCAGGACCCAATGTTTGGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTTCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTG                        <  2:780612/149‑1                                                                                                                              ATCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGC                       >  1:176940/1‑149                                                                                                                               TCAGTAAGTTGGCAGCATCACCAAAATCTGTGTGCAGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCC                      >  2:21677/1‑149                                                                                                                                 AGTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAG                    >  2:665612/1‑149                                                                                                                                  GTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGC                   >  1:284419/1‑149                                                                                                                                  GTAAGTTGGCAGCATCACCAAAATCTGTGTGCTGCTGAGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGC                   >  1:1043773/1‑149                                                                                                                                         GGCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGG            >  1:27935/1‑149                                                                                                                                          GCAGCATCACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGC           >  1:225224/1‑149                                                                                                                                             GCATCACCAAAATCTGTGTGCTGCGGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTAA        <  1:1150165/149‑1                                                                                                                                                  ACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGATAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTAATGTTT   >  1:1312577/1‑149                                                                                                                                                  ACCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTAATGTTT   >  1:1049283/1‑149                                                                                                                                                   CCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTAATGTTTT  <  1:1357133/149‑1                                                                                                                                                                                                                                                                                                         GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_pgi/258528‑258674 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTAATGTTTT  >  NC_000913_3_hsa_pgi/319809‑319956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.