| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 2728214 = | NA (NA) | 18 (0.190) | 9/288 | 8.5 | NA | noncoding (971/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
| ? | NC_000913_3_hsa_pgi | 2728240 = | NA (NA) | noncoding (945/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
AAGCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_pgi/2728365‑2728214‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGAGGCGCTACCTAAATAGCTTTCGGGGAGAACCAGCTATCTCC > NC_000913_3_hsa_pgi/2728240‑2728387 AAGCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTC < 1:772211/149‑1AAGCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTC < 1:378391/149‑1AAGCTATATAGGTACCGCCACGTGAATTCATCACCGGGGGTACAGCACGGTCTCGGAACGGGGTACATCCCTACTTACCAACCCGATGCAAACTGCGAAGACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTTACGTCCGTC < 2:752871/149‑1 AGCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTGTCGGCAAGGGGGTCATCCCGACTTACCACCCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTGCGTCG > 2:1233324/1‑149 gccaaTTAGGTAGCGCCGCGTGAATTCATCGCCGGGGGTCGAGCACTGTGTCGGCCAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGATTACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGT < 1:183649/144‑1 GCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGT < 2:1125588/149‑1 GCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGT < 2:343400/149‑1 GCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGACGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGT > 2:422707/1‑149 GCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGGCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGT < 1:31109/149‑1 GCTATTTAGGTAGCGACTCGTGATTTCATCTGCGGTGGTAGAGCACTGTTTCGGCAAGGGTGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGT < 2:335489/149‑1 GCTATTAAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGT < 2:657959/149‑1 caATTTAGGGAGCGCCTCGGGACTTCTTCTCCGGGGGTAGAGCCGAGTATCGGCAAGGGGGTCATCCCGACTAACCAACCCGATGCAAACTGCGAATACCGGAGAATGCTATCACGGGAGACACACGGCGGGGGCTAACGTCCGTCGTG < 2:1222154/147‑1 CTATTTAGGTAGCGCCTCGTGATTTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGTGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTG < 1:512885/149‑1 CTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTG > 1:641459/1‑149 CTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTG < 2:1258919/149‑1 ATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTATCCGGTATTCGCAGTTTGCATAGGGTTGGTAAGTCGGGTTGAC > 2:1445759/1‑149 GAATACCGGAGAATGTTATCACGGGAGACACCCGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGTGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGG > 2:739076/1‑149 TTATCACGGGAGACACACGGCGGGTGTTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGAG > 1:584227/1‑149 ACGGGAGACACACGGCGGGTGCTATCGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGGTGGTAAGTCGGGATGACCCCCTGGCCGAAACAGTGGTCTACCCACGGAGCTGAATTCACGAGGCGCT > 1:1409527/1‑149 ACACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGCGGCGCTACCTAAA > 1:951079/1‑149 ACACACGGCGGGTGCTAACGTC‑‑‑CGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGAGGCGCTACCTAAATAG > 1:788460/1‑149 CACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCACGAGCTAACATACTCCTGAATTCACAAATTGCATCGGGTTGGTAAGTCGGGCTGACCCCCGTGCCGAAACAGTGCTCGACCCCCGGAGATGAATACACGAGGCGCTACCTAAAT > 2:153146/1‑149 CACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCACGAGATAAAATTCTCATCTATTAGAAATTTGCATCGGGTTGGTAAGTCGGGATGACCCACTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCCCGAGGCGCTACCTAAAT > 2:969214/1‑149 ACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCTTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCACGGAGATGAATTCACGAGGCGCTAACTAAGTA > 2:697376/1‑149 ACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGCCCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGAGGCGCTACCTAAATA > 2:1433238/1‑149 ACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGAGGCGCTACCTAAATA > 1:430911/1‑149 ACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGAGGAATTCACGAGGCGCTACCTAAATA > 2:1364470/1‑149 ACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGAGCTCTACCCCCGGAGATGAATTCACGAGGCGCTACCTAAATA > 2:1246725/1‑149 ACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAACTCGGCATGACCCCCTTGCCGAATCAGTCCTATACCCCCGGAGATCAATTCACGACGCGCTCCCTATATA > 2:474022/1‑149 ACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGATTGCATCGGGTTGGTAAGTCGGGTTGACCCCCTTGCCGAAACGGTGCGCTACCCCCGGAGATGCATTCACGAGGCGCTTCCTAAGTA > 1:466583/1‑149 ACACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATACGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTATACCCCCGGAGTAGAATTCCCGAGGCGCTACCTAAATA > 2:59790/1‑149 CACGGCGGGTGCTAACGTCCGTCGTGTTTCTCACGTGATAACAATCTCCATTAATATAAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGAGGCGCTACCTAAATAG > 2:206692/1‑149 ACGGCGGGTGCTAACGTCCGTCGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGCCCCCCTTGCCGAAACAGTGCTCTCCCCCCGGAGATGAATTCACGAGGCGCTACCTATATAGC > 1:1128686/1‑149 CGTGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGAGGCGCTACCTAAATAGCTTTCGGGGAGAACCAGCTATC < 2:1137085/149‑1 TGTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCAGGAGATGAATTCACGAGGCGCTAGCTAAATAGCTTTCGGGGAGACCCAGCTATCTg > 1:1246854/1‑148 GTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGAGGCGCTACCTAAATAGCTTTCGGGGAGAACCAGCTATCTCC < 2:1451563/149‑1 AAGCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_pgi/2728365‑2728214‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgTGTCTCCCGTGATAACATTCTCCGGTATTCGCAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTTGCCGAAACAGTGCTCTACCCCCGGAGATGAATTCACGAGGCGCTACCTAAATAGCTTTCGGGGAGAACCAGCTATCTCC > NC_000913_3_hsa_pgi/2728240‑2728387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |