| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913_3_bme_pgi | 3,816,594 | Δ9 bp | intergenic (‑45/‑74) | rph ← / → yicC | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH/UPF0701 family protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913_3_bme_pgi | 3816594 | 3816602 | 9 | 45 [0] | [0] 45 | rph/yicC | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH/UPF0701 family protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_bme_pgi | = 3816593 | 0 (0.000) | 44 (0.990) | 40/284 | 0.2 | 100% | intergenic (‑44/‑83) | rph/yicC | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH/UPF0701 family protein |
| ? | NC_000913_3_bme_pgi | 3816603 = | 0 (0.000) | intergenic (‑54/‑73) | rph/yicC | ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH/UPF0701 family protein | |||||
GTATCGCCAAATTCGACCAGCACCGAGCCTTCTGCATGTTTTGTATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_bme_pgi/3816446‑3816593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTGGGAAATGCGC > NC_000913_3_bme_pgi/3816603‑3816750 GTATCGCCAAATTCGACCAGCACCGAGCCTTCTGCATGTTTTGTCTAGTTACGAGTCAGGGTAACGGGACGCACCTGATGATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGC < 1:597007/149‑1 GCCAAATTCGACCAGCACCGAGCCTTCTGCATGTTTTGTATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTACGCATTATACGCAGTTA > 1:265509/1‑149 AAATTCGACCAGCACCGAGCCTTCTGCATGTTTTGTATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTC < 2:577181/149‑1 ACCATCACCGAGCCCTCTGCATGTTTTGTATTGTTACGAGTCAGGGTGACGGGACGCTCCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCT < 2:462773/149‑1 GCACCGAGCCTTCTGCATGTTTTGTATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACA > 1:26448/1‑149 CACCGAGCCGTCTGCATGTTTTGTATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATACTGAAATCTCCGGCCTGAAACAAATGTGGCTGCGCATTATTCGCGGTTATTCCTATCCTGACAA < 2:466552/149‑1 CTGCAAGTTTTGTATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGG < 2:273025/149‑1 TATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTC < 1:32154/149‑1 ATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCC < 1:188141/149‑1 TAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCA > 2:438301/1‑149 TAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCA < 2:576250/149‑1 AGTTATGAGTCAGGGTAACGGGCCGCCACTGATTATTGCTACGGCCTCCAGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATGCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCAC < 1:188477/149‑1 CGAGGCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGGGGCATATGGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTC < 2:752878/149‑1 GTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTT < 2:44109/149‑1 TCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCCTCGATGGCTATAATCCTTCCACCTCTCCTTT < 1:426942/149‑1 TCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCCCCTCTCCTTT > 2:281086/1‑149 TCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTT > 2:34775/1‑149 CAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTT > 1:617107/1‑149 AGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTA > 1:408267/1‑149 ACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATATGGCTGCTCATTATACGCGGTTATTCCTATCCTGACAAGTCATCGACGCCTCTAATCCTTCCCCCTCTCCTTTTATAAACA > 2:715364/1‑149 GCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATAGCAAGGTTGCGTCCACCTCTCCTTTTATAAACAGGAACGT < 1:775807/149‑1 CCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTA < 2:696959/149‑1 ATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCG < 2:137959/149‑1 TGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCA < 1:438301/149‑1 CTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGT > 2:200655/1‑149 TACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTA < 1:34775/149‑1 ACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTCTTATAAACAGGAACGTCTATGATCCGCAGTAT > 2:321354/1‑149 GACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGAT < 2:68584/81‑1 GACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGAT > 1:68584/1‑81 TTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGT > 1:764797/1‑149 TTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGT < 1:293627/149‑1 TTGAAATCTCCGGCTTGAAACAAATGAGGCTGCGCATTATACGCAGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTAGGATCCGCAGTATGCCCGCCTACGCGCAGCGc > 2:235276/1‑148 taaatgcCCGTCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGA < 2:736071/142‑1 TCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGAATGACGGCCTACGCCCGTCGTGAAATC > 2:176568/1‑149 TCCGGCTTGAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCTCGCCGTGAAATCAA > 2:771676/1‑149 TCCGGCGAGAAACAGATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTTTGACCGCCTAAGCCCGCGGTACAATCAA > 2:536710/1‑149 GAAACAAATGTGGCTGCGCATTTTACGCGGTTATTCCTTTCCTGACAATGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAAT < 2:86090/149‑1 GAAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAAT < 2:26448/149‑1 AAACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATG > 1:486331/1‑149 ACAAATGTGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGG > 1:319886/1‑149 TGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCC < 1:691410/111‑1 TGGCTGCGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCC > 2:691410/1‑111 CGCATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGATATAATCCTTCCCCTTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCGACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTG < 2:10028/149‑1 CATTATACGCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGAAGCGCAACCTGGG > 1:198131/1‑149 GCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTGGGAAATGCGC > 1:374047/1‑149 GTATCGCCAAATTCGACCAGCACCGAGCCTTCTGCATGTTTTGTATAGTTACGAGTCAGGGTAACGGGACGCACCTGATTATTGCTACGGCCTGCTGGACGCATATTGAAATCTCCGGCTTGAAACAAATGTGGCTGCGCATTATACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_bme_pgi/3816446‑3816593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCGGTTATTCCTATCCTGACAAGGCATCGATGGCTATAATCCTTCCACCTCTCCTTTTATAAACAGGAACGTCTATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTGGGAAATGCGC > NC_000913_3_bme_pgi/3816603‑3816750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |