Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913_3_bme_pgi | 526,796 | 0 | C | G | 27.9% | 111.3 / 47.1 | 68 | A1179G (GCG→GGG) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
Reads supporting (aligned to +/- strand): ref base C (21/28); new base G (10/9); total (31/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.89e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAGGGGCGG > NC_000913_3_bme_pgi/526648‑526941 | cTTGCGCAGGGCGGGCTGAGGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAgcgc < 2:112969/149‑1 (MQ=255) ttGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTCCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGcgcg < 1:548869/149‑1 (MQ=255) gcgcAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGTGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGa < 1:323990/149‑1 (MQ=255) cAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAata < 1:212661/149‑1 (MQ=255) agggggggCGGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAatat < 2:291766/144‑1 (MQ=255) gTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATatg < 1:289832/149‑1 (MQ=255) gCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTatgat < 1:597874/149‑1 (MQ=255) gggCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTAtgatga > 1:506269/1‑149 (MQ=255) ggCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGaa > 1:44123/1‑149 (MQ=255) ggCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGCATatgatgga > 1:174397/1‑147 (MQ=255) tGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGAATgg < 2:547527/149‑1 (MQ=255) ggagggTGGAGCAACTGGCCAGACAGGTTGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATgg < 2:169075/145‑1 (MQ=255) ggcGGGGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATGACTGCGACCACCGGGGACTGCAGCTGGCGCTGATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGAATggg < 2:461223/147‑1 (MQ=1) gACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGAATggg < 2:44123/149‑1 (MQ=255) gACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGAGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGAATggg < 2:461244/149‑1 (MQ=11) gctgTGGGGGAACAGGCCAGGCAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTACCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATgggg < 2:132325/146‑1 (MQ=14) tGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAAc < 2:197468/149‑1 (MQ=255) gAGCAACTGGCCAGACAGGTGGAGCGGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGCCCGCTGGAGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAA‑ACGCCGTGGCGCGGGGAGTATGATGAATGGGGCAGCCa > 1:95913/1‑149 (MQ=11) gCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGc > 1:112025/1‑149 (MQ=255) cAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGCAGACGGCAAT‑ACGGCCTGGCGCCCGAACTAGGAACGATGGCGCAACCAGCt > 2:59598/1‑149 (MQ=14) cAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCt > 1:493830/1‑149 (MQ=255) aCTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCATT‑ACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTa > 1:572190/1‑149 (MQ=255) aCTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATAAATGGGGCAACCAGc > 2:43448/1‑146 (MQ=255) aCTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATAAATGGGGCAACCAGc < 1:43448/146‑1 (MQ=11) gCCGGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACGGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATga < 2:191955/149‑1 (MQ=255) ccAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATgag > 1:444786/1‑149 (MQ=255) cAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTAGCACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATgagg > 1:134987/1‑149 (MQ=11) cAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGaa < 2:444786/149‑1 (MQ=255) aGGTGGAGCCGAAAGACACACCGGCGCGCAAAGCCCATCTTTATCACTGCGACCAGCGGGGACTGCCGCTGGCGCTTATCAGCGAATAGGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAAc < 2:621593/149‑1 (MQ=17) ggTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAAcc < 2:609156/149‑1 (MQ=255) gTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCCCTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGACAGGGGCAACCAGCTTAATGAGGAGAAccc > 1:347817/1‑149 (MQ=11) gTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAAccc > 2:555850/1‑149 (MQ=255) gTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAAccc < 1:146978/149‑1 (MQ=255) tGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCACTAACGGCG‑GTGGCTGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCg > 1:20111/1‑149 (MQ=14) gCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATTGTGAATGGGGCAACCAGCTTAATGAGGAGAACCCGcatc > 1:537964/1‑149 (MQ=255) cGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACGGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACTGCGTGGGGCGCGGGATATGATGAATCGGGCAAACGGCTTACTGAGGGGGAACCGcatcag > 2:429106/1‑148 (MQ=14) aTACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATgtgt > 1:12405/1‑149 (MQ=255) acacCGGCGCGAAAAGCTGATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGCCCGACGGCGTAATGAGGAGAACCCGCATCATGTGTATCa < 2:149458/149‑1 (MQ=18) acacCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCa < 1:357101/149‑1 (MQ=255) acCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGc > 2:502890/1‑149 (MQ=255) cgcgAAAGGCCTATCTTCATCACGGCGTCCACCGGGGACTGCCGCTGGCGCTTAGAAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGTATATGATGAATGGCGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTAc < 2:522039/149‑1 (MQ=18) cgcgAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTAc < 2:12405/149‑1 (MQ=255) gAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGACAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCACACAGCTTAATGAGGAGAACCCGCATCAGATGTATCAgccgtgccgt > 1:531521/1‑149 (MQ=18) aaaaGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGt < 2:520016/148‑1 (MQ=255) aaaaGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGt > 1:520016/1‑148 (MQ=255) aaaGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCt < 1:629957/149‑1 (MQ=255) tCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAg > 1:256324/1‑149 (MQ=255) tCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAg < 1:324106/149‑1 (MQ=255) tCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAg > 1:329682/1‑149 (MQ=255) attcttATCACTGCGACCACCGGGGACTGCCGCTGGCGGTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAggg < 1:84045/145‑1 (MQ=255) cTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGgca < 1:688902/149‑1 (MQ=255) tttATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGAGGAGCGCGGAATATGACGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATAAGCGGTACCGTCTgccaggccag > 2:518437/1‑149 (MQ=17) tgggACCAGCGGGGACTGCCGCTGGCTCCTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCatga < 2:568598/146‑1 (MQ=255) caccGGGGACTGCCGCTGGCGCTTATCAGCGAAAACGGCACT‑ACGGGGTGGAGCGCAGAATATGAGGAATGGGGCGGCCAGCCTAATGAGGAGAACCCGCATCATGTGAATAAGCCGCACCGTCTGCCAGGCCAGAAGCAGAATCAGGa > 2:189716/1‑149 (MQ=17) cGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATCTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATc > 1:475228/1‑149 (MQ=255) gACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAggg < 1:173660/149‑1 (MQ=255) tGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACtat > 1:495183/1‑149 (MQ=255) gcTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTCTAAcc > 1:22698/1‑149 (MQ=255) gcTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAAAGGGCAAATTAGCGTTATGAGAAGAACCCGCATCATGTGTATTAGCCGTACCGTCTGCCAGGGCCGCAACATGATGAGGAATCCGGGCTGTACTATaagc > 2:426553/1‑147 (MQ=17) aGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCg < 2:613482/149‑1 (MQ=255) cGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGt > 2:370898/1‑149 (MQ=255) gAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGta < 1:502890/149‑1 (MQ=255) gACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGtacta < 2:399478/149‑1 (MQ=255) gACGGAAAT‑ACGGCGGGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGtacta < 2:174397/149‑1 (MQ=255) cAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCATGGCTGTACTATAACCGTCACCGGTACTACGATc > 2:619418/1‑149 (MQ=255) aT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCg > 2:139293/1‑149 (MQ=255) aCGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGtt < 1:152405/149‑1 (MQ=255) aCGGCGTGGAGCGCGAAACATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGtt < 1:152374/149‑1 (MQ=255) catGGAGCGCGGAATATGATGAATGGGGCAACCAGCTCAATGAGGCGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAg < 1:604113/147‑1 (MQ=255) tGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAggg < 1:59598/149‑1 (MQ=255) gctcgGAATATGCTGAATGGGGCAACCAGCTTAATGGGGAGAACCCGGATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTATTATAACCGTCACCGGTACTACGATCCGTTGCAGGGGCgg < 2:223798/146‑1 (MQ=17) | CTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAAT‑ACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAGGGGCGG > NC_000913_3_bme_pgi/526648‑526941 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |