| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_bme_pgi | 4,233,689 | 2 bp→AG | intergenic (‑456/‑2217) | lysC ← / → yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_bme_pgi | 4,233,689 | 0 | C | A | 100.0% | 133.1 / NA | 38 | intergenic (‑456/‑2218) | lysC/yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (22/16); total (22/16) | |||||||||||
| * | NC_000913_3_bme_pgi | 4,233,690 | 0 | A | G | 100.0% | 130.3 / NA | 38 | intergenic (‑457/‑2217) | lysC/yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (22/16); total (22/16) | |||||||||||
AAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAGCAACGGTCGCAAAGCTGAAAAAGCATTGGGCGGAATCGGCCC > NC_000913_3_bme_pgi/4233546‑4233827 || aaataaaGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCAttt > 4:147244/1‑150 (MQ=255) taaaGGGTGAGCGGGGCGGTTGTCANCGATGGGGNCATNCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTc > 3:338320/1‑150 (MQ=255) gTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCtt < 2:144797/150‑1 (MQ=255) ggggTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCtg < 1:458626/122‑1 (MQ=255) ggggTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCtg > 2:458626/1‑122 (MQ=255) gCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCaaa < 4:140214/138‑1 (MQ=255) gCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCaaa > 3:140214/1‑138 (MQ=255) cGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTGCAATCTTCCAAAGTCACAATTCTCa > 3:307733/1‑150 (MQ=255) ggATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCaa > 1:83347/1‑150 (MQ=255) tttCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCa < 3:31786/150‑1 (MQ=255) ttCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGCTTACCCTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTATGACTGGCGCTACAATCTTCCAAAGTCACACTTCTCAAAATCag > 3:332984/1‑150 (MQ=255) cACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGt < 3:4766/150‑1 (MQ=255) aCTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTa > 2:445031/1‑150 (MQ=255) agtagtTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTGCAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCaa < 4:307733/150‑1 (MQ=255) gtagtTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaa > 4:62992/1‑131 (MQ=255) gtagtTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaa < 3:62992/131‑1 (MQ=255) tagtTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAagag < 4:104049/133‑1 (MQ=255) tagtTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAagag > 3:104049/1‑133 (MQ=255) gtTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAgaga < 3:290736/150‑1 (MQ=255) gCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGcga > 4:34157/1‑150 (MQ=255) ttCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAg > 3:112638/1‑150 (MQ=255) tGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAGCAACg > 2:472961/1‑150 (MQ=255) gggTTTACACTCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAGCAACGGTCGCaaa > 4:163835/1‑150 (MQ=255) tCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCtt > 2:561439/1‑61 (MQ=255) tCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCtt < 1:561439/61‑1 (MQ=255) tCAACATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAGCAACGGTCGCAAAGCTGAAAAAg > 1:477651/1‑150 (MQ=255) aaCATTACGCTAACGGCACTAAAACCATAGCATTTTTTTTTTACTTTCACTACAATCTTCCAAAATCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGCCGCGACAAAAATTGAATCAACGGTCGCAAAGCTGAAAAAGCa > 2:203966/1‑150 (MQ=255) aaCATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTg < 3:90762/122‑1 (MQ=255) aaCATTACGCTAACGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTg > 4:90762/1‑122 (MQ=255) ataTTACGCTAAAGGCACTAAAACAATAGCATTTTTCTGTGAGTGGTGATACAATCTTCCAAAGTAACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAGCAACGGTCGCAAAGCTGAAAAAGCAt < 4:338320/148‑1 (MQ=255) gCTAACGGCACTAAAACCATAGCATTTTTCTGTGAc < 3:229790/36‑1 (MQ=255) gCTAACGGCACTAAAACCATAGCATTTTTCTGTGAc > 4:229790/1‑36 (MQ=255) aaCGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAGCAACGGTCGCAAAGCTGAAAAAGCATTGGGCGGAAt > 4:87522/1‑150 (MQ=255) aCGGCACTAGAAGCATAGCAGTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAATATCAGAAGGGTAGTGCTAATGGCAGGAGACCCGGCGAAGCTTCAATCAACGCTCTTATTGTTTAAAAAGCATTGGGCGGAATc < 4:175651/150‑1 (MQ=255) cGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTca < 3:90311/55‑1 (MQ=255) cGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTca > 4:90311/1‑55 (MQ=255) cGGCACTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAGCAACGGACAAAAAGCTAAAAAAGCATTGGGCGGAATCg < 2:83347/150‑1 (MQ=255) aCTAAAACCATAGCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAGCAACGGTCGCAAAGCTGAAAAAGCATTGGGCGGAATCGGccc > 1:553493/1‑150 (MQ=255) || AAATAAAGGGTGAGCGGGGCGGTTGTCAACGATGGGGTCATGCGGATTTTTCATCCACTCCTGGCGGTCAGTAGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAATGGCAAGAGACGCGACGAAGCTTGAAGCAACGGTCGCAAAGCTGAAAAAGCATTGGGCGGAATCGGCCC > NC_000913_3_bme_pgi/4233546‑4233827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |