| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1826496 | 63 (1.290) | 3 (0.080) | 4/78 | NT | 6.0% | intergenic (‑173/‑262) | hydN/mutS | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit/methyl‑directed mismatch repair protein |
| ? | Exported | = 1826503 | 45 (1.180) | intergenic (‑180/‑255) | hydN/mutS | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit/methyl‑directed mismatch repair protein | |||||
GCAGGAAAAACGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1826419‑1826496‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attaagatgtaATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGTCACTAGTGTCGAT < Exported/1826503‑1826436 GCAGGAAAAACGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATT > 1:1135131/1‑70GCAGGAAAAACGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCAT > 1:47725/1‑69 GGAAAAACGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTA > 1:3040299/1‑68 GGAAAAACGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGACTCCACCTCATTA > 1:425961/1‑68 GACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGT < 1:821582/57‑1 ACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGT < 1:952511/56‑1 TGACGATTACATGTGATGACAATGTGCTGCCTCCACCTCATTAA < 1:1473514/44‑1 TGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTAATATAAATACATCT < 1:118684/64‑1 GACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGAT > 1:169396/1‑40 GTGCTGCCTCCACCTCATTAAGATGTAATATAAATA > 1:2351217/1‑36 GTGCTGCCTCCACCTCATTAAGATGTAATATAAATA > 1:2772190/1‑36 ATTAAGATGTAATATAAATACATCTTAATGAGGTGGAGGCAGCACAT < 1:1752660/47‑1 TAAGATGTATTTATATTACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGTCACT < 1:276169/68‑1 TAAGATGTATTTATATTACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGT < 1:1582991/64‑1 TAAGATGTATTTATATTACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGT < 1:1735299/64‑1 TAAGATGTAATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGTCACTAGT > 1:1528680/1‑71 TAAGATGTAATATAAATACATCTTAATGAGGTGGAGGCAGCACATTG > 1:1205440/1‑47 AGATGTAATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCAT > 1:1629401/1‑59 AGATGTAATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCAT > 1:269540/1‑59 GATGTAATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGTCACTAGTGTC < 1:1140403/71‑1 GATGTAATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGTCACTAGTGTC < 1:1828360/71‑1 ATGTAATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGTCACTAGTGTCG < 1:699069/71‑1 ATGTAATATAAATACATCTTAATGAGGTGGAGGCAGCACA < 1:620176/40‑1 GTAATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGACACTAGTGACGAT > 1:41920/1‑71 GTAATATAAATACATCTTAATGAGGTGGAGGCAGCACAT > 1:1971583/1‑39 TAATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACAT < 1:18772/49‑1 GCAGGAAAAACGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTGCTGCCTCCACCTCATTAAGATGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1826419‑1826496‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attaagatgtaATATAAATACATCTTAATGAGGTGGAGGCAGCACATTGTCATCACATGTCATCGTCACTAGTGTCGAT < Exported/1826503‑1826436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |