New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AP009048 | = 3931054 | 106 (1.810) | 4 (0.070) | 4/102 | NT | 4.0% | coding (1115/1692 nt) | eptB | predicted metal dependent hydrolase |
? | AP009048 | = 3931080 | 88 (1.500) | coding (1141/1692 nt) | eptB | predicted metal dependent hydrolase | |||||
Rejected: Frequency below/above cutoff threshold. |
ATCGTGAGCAGATTGGTGCGGAGCCACGTAATCGTGGCAAGCCGGTAGATGATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3931000‑3931054 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTGCTGCATTTCGTCTACCAGCA < AP009048/3931080‑3931057 ATCGTGAGCAGATTGGTGCGGAGCCACGTAATCGTGGCAAGCCGGTAGATGATATGTTGCTGCATTTCGTC > 1:5341332/1‑71 AGCAGATTGGTGCGGAGCCACGTAATCGTGGCAAGCCGGTAGATGATATATTGCTGCATTTCGTCTACCA < 1:4745831/70‑1 GCAGATTGGTGCGGAGCCACGTAATCGTGGCAAGCCGGTAGATGATATGTTGCTGCATTTCGTCTACCAGC < 1:4458671/71‑1 AGATTGGTGCGGAGCCACGTAATCGTGGCAAGCCGGTAGATGATATATTGCTGCATTTCGTCTACCAGCA < 1:3191925/70‑1 ATCGTGAGCAGATTGGTGCGGAGCCACGTAATCGTGGCAAGCCGGTAGATGATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3931000‑3931054 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTGCTGCATTTCGTCTACCAGCA < AP009048/3931080‑3931057 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |