| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 381461 = | NA (NA) | 4 (0.080) | 3/90 | NT | NA | coding (564/906 nt) | insD | IS2 insertion element transposase InsAB' |
| ? | AP009048 | 381491 = | NA (NA) | coding (594/906 nt) | insD | IS2 insertion element transposase InsAB' | |||||
CGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/381535‑381461‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggaTAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA > AP009048/381491‑381559 CGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:3190847/1‑71CGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:46358/1‑71 GGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGAC < 1:1070383/71‑1 GGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGAC < 1:4306345/71‑1 GGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGAC > 1:4967819/1‑71 GGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGGCAGCCACTCCACTGGAGACGAC < 1:5271863/71‑1 GGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG < 1:2718660/71‑1 GGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG < 1:1872895/71‑1 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:1080248/71‑1 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:3454402/71‑1 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:4737302/71‑1 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG > 1:5191609/1‑70 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG > 1:2982045/1‑70 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:861275/1‑68 CGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:702822/70‑1 CGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:3902966/1‑70 GAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGATGACGGA > 1:540582/1‑70 GAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:3408541/1‑69 AACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:105631/1‑68 AACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:2303825/1‑68 AACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:5287346/1‑68 AACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG > 1:1997216/1‑67 ACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:3662674/1‑67 ACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:3992680/1‑67 ACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:1952837/1‑67 CTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:5337454/1‑66 TGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:4454018/65‑1 TGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:991848/1‑65 GCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGA < 1:4755425/64‑1 GCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGA < 1:200717/64‑1 TGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:4048087/60‑1 TTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACG < 1:4497288/54‑1 TTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGAC > 1:4920847/1‑55 TCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACG > 1:324683/1‑52 TTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:4934605/1‑50 TTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:4038125/1‑50 GCATGAACCATTATCCGTCAGCCACTCCACTGGAGACG < 1:2715531/38‑1 ATGAACCATTATCCGTCAGCCACTCCACTGGAGACGAC > 1:2141896/1‑38 TGAACCATTATCCGTCAGCCACTCCACTGGAGACGAC > 1:5238669/1‑37 TGAACCATTATCCGTCAGCCACTCCACTGGAGACG > 1:3925987/1‑35 CATTATCCGTCAGCCACTCCACTGGAGACGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGC > 1:2005532/1‑69 CATTATCCGTCAGCCACTCCACTGGAGACGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGC > 1:2011909/1‑69 ATCCGTCAGCCACTCCACTGGAGACGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTC > 1:4434924/1‑71 TCCGTCAGCCACTACACTGGAGACGACGGATAATGGTTCATGCTACCGGGCTAATGAAACA > 1:2914987/1‑61 GACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:1106935/1‑70 GACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAA > 1:2495534/1‑67 GACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGT < 1:3148062/56‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACTCCAGTTCGCCCGGATGTTGGGACTTGAACCGAA < 1:1814890/71‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAA < 1:3051154/71‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAA < 1:1292370/71‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAA < 1:2746082/71‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:972382/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:4292570/69‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:1063544/69‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:270751/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:1279528/69‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:2667881/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:3125301/69‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:1333645/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTT > 1:817290/1‑63 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTC > 1:3304440/1‑45 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGC > 1:837174/1‑39 ACGGATAATGGTTCATGCTACCGGGCTAATGAAAC > 1:865578/1‑35 ACGGATAATGGTTCATGCTACCGGGCTAATGAAAC > 1:2911803/1‑35 ACGCATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAA < 1:3918712/71‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAG < 1:521851/71‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAG < 1:2650791/71‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:1960980/1‑68 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:2098643/1‑68 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:3571910/68‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAAC > 1:1242931/1‑66 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAA < 1:3676495/65‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAA > 1:2940011/1‑65 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTT > 1:3193464/1‑43 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTT > 1:4319100/1‑43 GGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAG > 1:322034/1‑70 GGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAG < 1:3004408/70‑1 GGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:5274594/67‑1 GGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGG > 1:4444464/1‑56 GGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGA > 1:991780/1‑50 GGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCA > 1:4505889/1‑39 GATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGG > 1:780108/1‑56 GATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTC < 1:1371279/42‑1 GATAATGGTTCATGCTACAGGGCTAATGAAACACGCCAGTTCGCCCGGATGTT > 1:853771/1‑53 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA > 1:1836769/1‑70 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA > 1:697337/1‑70 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA > 1:2318273/1‑70 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA > 1:4102530/1‑70 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAG > 1:2819909/1‑68 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAAC > 1:327372/1‑63 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGAC > 1:2540309/1‑57 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGA > 1:3625655/1‑48 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCG > 1:1805802/1‑46 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTT > 1:5059347/1‑40 ATAATGGTTCATGCTACCGGGCTAATGAAACACGC < 1:1780486/35‑1 CGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/381535‑381461‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggaTAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA > AP009048/381491‑381559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |