| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 315215 = | NA (NA) | 5 (0.090) | 5/94 | NT | NA | coding (405/867 nt) | insF | IS3 element protein InsF |
| ? | AP009048 | 315238 = | NA (NA) | coding (428/867 nt) | insF | IS3 element protein InsF | |||||
Only 100 of 108 total aligned reads displayed.
TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/315288‑315215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC > AP009048/315238‑315306 TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:3111666/71‑1TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:2602149/71‑1TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:5234109/71‑1TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:1929335/71‑1TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:4930174/71‑1TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:3030740/71‑1TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:3149520/71‑1TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:3295130/71‑1TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:744204/71‑1TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:770547/71‑1 AACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:828125/1‑71 AACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:4140111/1‑71 AACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:667171/1‑71 AACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:2170274/1‑71 AACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:2197075/1‑71 AACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:656454/1‑71 AACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:87716/1‑71 ACGGCACGTGACCACAGGTCAATGACCACTGTCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT > 1:3239248/1‑71 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT < 1:462575/71‑1 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT > 1:2732254/1‑71 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT < 1:3739453/71‑1 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT < 1:3884401/71‑1 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT < 1:585307/71‑1 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT > 1:632086/1‑71 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT < 1:2395526/71‑1 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT > 1:1683383/1‑71 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT > 1:2034762/1‑71 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT < 1:1701440/71‑1 ACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA < 1:1252169/70‑1 tGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT < 1:3511666/69‑1 CGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATG < 1:715489/71‑1 CGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATG < 1:2727861/71‑1 CGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATG > 1:282192/1‑71 CGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG > 1:4868046/1‑68 GGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATG < 1:721862/70‑1 GCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATG < 1:4140301/69‑1 GTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:3722401/1‑63 GTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:5227328/62‑1 GTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:300298/62‑1 GTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:3066187/62‑1 ACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:25515/1‑60 ACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:667257/59‑1 ACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:3437200/59‑1 CAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:4921777/1‑51 CAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:3595708/1‑51 CAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:2688111/1‑51 AATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:2230460/1‑50 ATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT > 1:4624805/1‑50 TGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT > 1:1563220/1‑49 TGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT < 1:4103316/49‑1 GACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGAT > 1:4570057/1‑48 CACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATG < 1:733088/46‑1 CAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:3701996/1‑38 CAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:4589990/1‑38 CAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG < 1:1298430/37‑1 AGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGA > 1:2395353/1‑37 CTTCATCTGTACGTAAGTACGTGATGAAGGCTGGCTGTATCTGGCAGTGGTCA < 1:604586/53‑1 TCATCTGTACGTAAGTAC‑AGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGT < 1:4073611/62‑1 CATCTGTACGTAAGTACGTGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCG > 1:4464046/1‑71 ATCTGTACGTAAGTACGTGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTG < 1:1054442/67‑1 TCTGTACGTAAGTACGTGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGT < 1:266831/70‑1 GATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTC < 1:4654364/71‑1 GATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTC < 1:966690/71‑1 GATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTC < 1:2755820/71‑1 GATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTC < 1:1460754/71‑1 GATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTC > 1:3144138/1‑71 GATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTC > 1:1263667/1‑71 GATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCA < 1:817948/66‑1 GATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTG < 1:1335516/49‑1 GATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGG > 1:380855/1‑42 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCG < 1:4173407/71‑1 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCG < 1:2647935/71‑1 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCG > 1:67104/1‑71 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCG > 1:4979813/1‑71 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCG > 1:2879388/1‑71 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCG < 1:105298/71‑1 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTC > 1:2800418/1‑70 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGT < 1:1421918/69‑1 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGT < 1:22870/69‑1 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGC < 1:582012/59‑1 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTC < 1:3514152/43‑1 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGT < 1:1364991/42‑1 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGT < 1:3436274/39‑1 ATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGAC < 1:894028/35‑1 ATGAAGGCTGGCTGTATCTGGCAGTGCTCATTGACCTG < 1:1008701/38‑1 TGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC < 1:2135704/71‑1 TGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC < 1:1576361/71‑1 TGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC < 1:2697214/71‑1 TGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC > 1:5107313/1‑71 TGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC < 1:4958410/71‑1 TGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC < 1:3002229/71‑1 GAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC > 1:3488901/1‑70 GAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC > 1:3900174/1‑70 GAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC > 1:4267322/1‑70 GAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTC > 1:2756213/1‑68 GAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAA > 1:5351996/1‑64 GAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTC > 1:1415901/1‑62 GAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTG > 1:801002/1‑59 GAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGG > 1:2783662/1‑39 GAAGGCTGGCTGTATCTCGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTAGCTGGTCAATGTCGC > 1:813386/1‑70 TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/315288‑315215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGC > AP009048/315238‑315306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |