| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 225408 = | NA (NA) | 3 (0.060) | 3/92 | NT | NA | noncoding (28/77 nt) | ileV | tRNA‑Ile |
| ? | AP009048 | 225425 = | NA (NA) | noncoding (45/77 nt) | ileV | tRNA‑Ile | |||||
CTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/225481‑225408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACAT > AP009048/225425‑225494 CTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGCGTGGACTTGAACCACCGACCTCACCCTTATCAGGG < 1:1019555/71‑1CTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG < 1:1253221/71‑1CTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG < 1:949782/71‑1 CTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGT > 1:2376542/1‑71 TTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACATCACCCTTATCAGGGG < 1:1008600/69‑1 TCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG > 1:3036795/1‑70 GCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG > 1:1119416/1‑55 CAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG > 1:345685/1‑54 CAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG > 1:2971585/1‑54 CAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGG > 1:203002/1‑54 CAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG > 1:2971588/1‑53 CAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG > 1:4536897/1‑53 TTTGGTAGGCCTGAGTGGACTTGATCCACCGACCTCACCCTTATCAGGG < 1:3873631/49‑1 TTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG < 1:1375850/49‑1 TTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG > 1:795272/1‑49 GTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGT < 1:5079228/47‑1 GGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGG > 1:4639803/1‑42 CCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGT > 1:5141365/1‑42 TCACCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTT < 1:4643459/69‑1 CACCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCACTCAGG > 1:2019653/1‑43 ACCCTTATCAGGGGTGAGGTCGGTGGTTCAAGTCCA > 1:4224777/1‑36 GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACT < 1:1862130/71‑1 GGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAAT < 1:1445860/54‑1 GGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGA < 1:580189/60‑1 GTGAGGTCTGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTAC < 1:1927207/71‑1 GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTAC < 1:956534/71‑1 GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTA > 1:5002701/1‑70 GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACT > 1:2405152/1‑69 GTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCA < 1:5073525/44‑1 TGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACA < 1:5267024/71‑1 TGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACT < 1:2439253/68‑1 GAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACAT > 1:944728/1‑71 CTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/225481‑225408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACAT > AP009048/225425‑225494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |