| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 7063 | 64 (1.090) | 18 (0.330) +GATT |
11/94 | NT | 35.2% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | AP009048 | = 2564144 | 8 (0.140) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
GATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/7045‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGT < AP009048/2564144‑2564076 |||| gtgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:960541/4‑71 tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA < 1:2795089/68‑1 tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCA < 1:4368924/67‑1 tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGA < 1:598461/43‑1 gAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:3962971/2‑71 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:4013627/70‑1 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:4558656/70‑1 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGT < 1:1286982/61‑1 AAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA < 1:1194575/71‑1 AAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA > 1:2311685/1‑49 AATGCCAATCATCGCTTCTTCCTGAGGGAACGACT < 1:4245912/35‑1 AATGCCAATCATCGATTCTTCCTGAGGGAACGACT < 1:2245501/35‑1 TGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATC < 1:451429/71‑1 TGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATA > 1:3642118/1‑69 CCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAG < 1:2215648/71‑1 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:1132805/46‑1 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAA < 1:5179534/40‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTT > 1:835914/1‑70 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT > 1:633975/1‑70 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCA > 1:3671482/1‑66 CATCGATTCTTCCTGAGGGAACGACTTAAGAAACTAAAGACCACATTGTTCGGCAAT > 1:3130864/1‑57 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:87656/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA > 1:1104213/1‑37 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGA > 1:292708/1‑70 TTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:405371/1‑54 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGT > 1:5255829/1‑70 |||| GATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/7045‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGT < AP009048/2564144‑2564076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |