| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 436259 = | 64 (0.910) | 24 (0.370) | 14/92 | NT | 30.2% | intergenic (‑156/‑29) | ybfF/seqA | conserved hypothetical protein/regulatory protein for replication initiation |
| ? | Exported | = 2706018 | 52 (0.800) | coding (836/837 nt) | dam | DNA adenine methylase | |||||
GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/436331‑436259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGT < Exported/2706018‑2705951 GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG > 1:1430243/1‑70GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG < 1:3906058/70‑1GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG < 1:3866162/70‑1GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG < 1:3018577/70‑1GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG > 1:2476491/1‑70 ATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATT < 1:3218792/71‑1 ATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT > 1:688043/1‑70 TATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTA < 1:3329540/71‑1 TAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATT > 1:3794034/1‑71 CTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTT < 1:966438/71‑1 CTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTT < 1:4208875/71‑1 ttTAGAGTTCATCATCAACTTCAATGGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTT < 1:4265584/68‑1 AGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGC > 1:3763395/1‑71 AGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCG > 1:2792345/1‑70 AGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATT > 1:1775064/1‑61 AGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT > 1:2400886/1‑60 TTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATT < 1:1598385/60‑1 TTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATT < 1:1596717/60‑1 ATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAAC < 1:2981150/70‑1 TCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTA > 1:1207285/1‑51 TCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑T < 1:1577694/69‑1 TCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑T < 1:518871/69‑1 CGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTG > 1:2928841/1‑71 TTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTG > 1:752387/1‑51 TTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTGCTGGCTTTGTA > 1:4113931/1‑70 CATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACA > 1:4291135/1‑69 CATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACA > 1:2689068/1‑69 CATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACA > 1:3656693/1‑69 TTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGT > 1:2238442/1‑43 TTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGT > 1:764982/1‑43 AATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCC < 1:30527/68‑1 AATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGC < 1:3406808/67‑1 ATCCAGTTCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCC < 1:2201177/67‑1 ATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA < 1:4001775/42‑1 CTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTT < 1:4138030/70‑1 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAG > 1:700613/1‑57 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAG > 1:1855454/1‑57 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAG > 1:1115353/1‑54 AGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCA > 1:3636352/1‑54 AGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCA > 1:2245061/1‑54 AGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCA > 1:1897180/1‑54 CTGAATTATTTTTTCGCGGGGGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACG < 1:3723495/71‑1 GAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTG > 1:390443/1‑71 GAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTG > 1:1088234/1‑71 AATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGT > 1:2883504/1‑71 TTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTT < 1:673997/61‑1 TTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTT < 1:1818096/61‑1 GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/436331‑436259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGT < Exported/2706018‑2705951 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |