| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 26935 = | 32 (0.450) | 3 (0.050) | 3/78 | NT | 7.4% | intergenic (+62/‑394) | dapB/carA | dihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase |
| ? | Exported | 26998 = | 50 (0.910) | intergenic (+125/‑331) | dapB/carA | dihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase | |||||
AACAGAAGACAAAACATGTAATTTTTGGCACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAAAAATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/27015‑26935‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaaaattaCATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGC > Exported/26998‑27063 AACAGAAGACAAAACATGTAATTTTTGGCACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGG > 1:686406/1‑71 GACAAAACATGTAATTTTTGGCACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGC > 1:757157/1‑65 GACAAAACATGTAATTTTTGGCACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGC > 1:3478963/1‑65 GACAAAACATGTAATTTTTGGCACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGC > 1:2996930/1‑65 ACAAAACATGTAATTTTTGGCACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAAAAA < 1:1767077/70‑1 CAAAACATGTAATTTTTGGCACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAAAAATT < 1:4224001/71‑1 AAAACATGTAATTTTTGGCACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAAAAATT > 1:2306427/1‑70 ACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAA < 1:405780/46‑1 ACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAA < 1:4340561/46‑1 ACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAA < 1:630971/46‑1 ACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAA < 1:2568210/46‑1 ACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAA < 1:1461482/46‑1 ATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAAAAATTACATGTTTTGTCTTCTGTTTTTGT > 1:2437364/1‑71 ATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAAAAATTA > 1:685477/1‑48 ACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAAAAATTACATGTTTTGTCTTCTGTTTTTGTTGTT < 1:1404070/71‑1 ATTTAAAAACATAACACCAAAAATAAAAGGGCCAAA < 1:1618033/36‑1 AAAACATAACACCAAAAATAAAAGGGCCAAAAATTACATGTTTTGT > 1:633502/1‑46 CCAAAAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTT < 1:4204718/70‑1 CCAAAAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTT < 1:41342/70‑1 CCAAAAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTT < 1:1377873/70‑1 CCAAAAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTT < 1:4068835/70‑1 CCAAAAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTT < 1:3403992/70‑1 CCAAAAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTA < 1:3370240/40‑1 CCAAAAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTA < 1:4424890/40‑1 AAAATTACATTTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCT < 1:354474/71‑1 AAAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCT > 1:1045366/1‑71 AAAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATT < 1:2166057/46‑1 AAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAA < 1:64570/43‑1 AAATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAA < 1:944562/43‑1 AATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGC > 1:3365126/1‑71 AATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGC > 1:2013998/1‑71 AATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTT > 1:2874462/1‑54 AATTACATGTTCTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTT > 1:546006/1‑67 ATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTT > 1:1895065/1‑66 ATTACATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCA > 1:719566/1‑50 AACAGAAGACAAAACATGTAATTTTTGGCACTTATAGACAATTTAAAAACATAACACCAAAAATAAAAGGGCCAAAAATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/27015‑26935‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaaaattaCATGTTTTGTCTTCTGTTTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGC > Exported/26998‑27063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |