| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3711929 | 79 (1.400) | 4 (0.080) | 3/94 | NT | 5.4% | coding (882/1890 nt) | gidA | glucose‑inhibited cell‑division protein |
| ? | AP009048 | = 3711950 | 68 (1.310) | coding (903/1890 nt) | gidA | glucose‑inhibited cell‑division protein | |||||
AAGGTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3711856‑3711929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGAC < AP009048/3711950‑3711881 AAGGTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCAT < 1:2790683/71‑1 GGTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCA < 1:3128503/71‑1 GTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAG < 1:3436019/71‑1 GTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCAT > 1:4472625/1‑68 TCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCA > 1:2202937/1‑67 TCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCA > 1:2414169/1‑67 GTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAG < 1:264071/49‑1 TCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAG < 1:4027217/48‑1 GATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGTCCTTCCGGTTCAAGGAAGATCTG < 1:2565996/70‑1 ATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGTCCTTCCGGTTCAAGGAAGATCTG < 1:2881777/69‑1 TCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGTCCTTCCGGTTCAAGGAAGA < 1:723573/64‑1 AAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCGGTTCAAGGAAGATC > 1:4388604/1‑58 TCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCT < 1:1753706/40‑1 TCAGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTGCTGTCGGCGAAGCGCATGACTTTGTCTTCGATC < 1:2826628/71‑1 AGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGA > 1:2333974/1‑71 AGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGA > 1:3808980/1‑71 AGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGA < 1:4904642/71‑1 AGTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCG < 1:4644195/70‑1 GTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCTAAGCGCATGACTTT > 1:3648952/1‑58 GTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGAC < 1:387759/71‑1 AAGGTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3711856‑3711929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagTCCTTCCGGTTCAAGGAAGATCTGATGCTGATTTCTGTCGGCGAAGCGCATGACTTTGTCTTCGATCGAC < AP009048/3711950‑3711881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |